RNA–Protein interactions for RNA: ENST00000416242.2

LINC01388-201, Transcript of long intergenic non-protein coding RNA 1388, humanhuman

TSL 3 BASIC

Gene LINC01388, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01388-201ENST00000416242 GABRA6Q16445 453 aa12.55□□□□□ -0.4
LINC01388-201ENST00000416242 ZNF672Q499Z4 452 aaPredicted RBP12.55□□□□□ -0.4
LINC01388-201ENST00000416242 RABL3Q5HYI8 236 aa12.55□□□□□ -0.4
LINC01388-201ENST00000416242 EPHX4Q8IUS5 362 aa12.55□□□□□ -0.4
LINC01388-201ENST00000416242 DEPDC4Q8N2C3 294 aa12.55□□□□□ -0.4
LINC01388-201ENST00000416242 GPR32P1Q8NGA4 272 aa12.55□□□□□ -0.4
LINC01388-201ENST00000416242 OR6T1Q8NGN1 323 aa12.55□□□□□ -0.4
LINC01388-201ENST00000416242 ZNF417Q8TAU3 575 aa12.55□□□□□ -0.4
LINC01388-201ENST00000416242 TAAR8Q969N4 342 aa12.55□□□□□ -0.4
LINC01388-201ENST00000416242 TAMM41Q96BW9 452 aa12.55□□□□□ -0.4
LINC01388-201ENST00000416242 SLC41A3Q96GZ6 507 aa12.55□□□□□ -0.4
LINC01388-201ENST00000416242 ZNF587Q96SQ5 575 aaPredicted RBP12.55□□□□□ -0.4
LINC01388-201ENST00000416242 LINC00470Q9BZP3 86 aa12.55□□□□□ -0.4
LINC01388-201ENST00000416242 SLC19A3Q9BZV2 496 aa12.55□□□□□ -0.4
LINC01388-201ENST00000416242 NSRP1Q9H0G5 558 aaKnown RBP12.55□□□□□ -0.4
LINC01388-201ENST00000416242 TRAPPC13A5PLN9 417 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 DPRXA6NFQ7 191 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 FAM220BPB1ANY3 271 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 TPST2O60704 377 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 SLC43A1O75387 559 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 NQO1P15559 274 aaKnown RBP12.54□□□□□ -0.4
LINC01388-201ENST00000416242 CD247P20963 164 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 GRPRP30550 384 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 PRPS1P60891 318 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 RPS4XP62701 263 aaKnown RBP12.54□□□□□ -0.4
LINC01388-201ENST00000416242 FOXD4Q12950 439 aaPredicted RBP12.54□□□□□ -0.4
LINC01388-201ENST00000416242 ENTPD8Q5MY95 495 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 NIPAL3Q6P499 406 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 UEVLDQ8IX04 471 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 OR2T12Q8NG77 320 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 OR52N5Q8NH56 324 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 ADAMTS16Q8TE57 1224 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 IGFBPL1Q8WX77 278 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 SLC17A5Q9NRA2 495 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 MRPL39Q9NYK5 338 aaKnown RBP12.54□□□□□ -0.4
LINC01388-201ENST00000416242 ARMCX1Q9P291 453 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 B3GAT1Q9P2W7 334 aa12.54□□□□□ -0.4
LINC01388-201ENST00000416242 ABCD4O14678 606 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 PLAUP00749 431 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
LINC01388-201ENST00000416242 SELENOPP49908 381 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 CLDN17P56750 224 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 IL1RL1Q01638 556 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 PUDPQ08623 228 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 Q5PR19 223 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 HMBOX1Q6NT76 420 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 TTC33Q6PID6 262 aaPredicted RBP12.53□□□□□ -0.4
LINC01388-201ENST00000416242 SPATA21Q7Z572 469 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 C10orf53Q8N6V4 93 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 PIK3C3Q8NEB9 887 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 ZNF583Q96ND8 569 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 HOPXQ9BPY8 73 aaPredicted RBP12.53□□□□□ -0.4
LINC01388-201ENST00000416242 GRIP2Q9C0E4 1043 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 ZNF701Q9NV72 531 aaPredicted RBP12.53□□□□□ -0.4
LINC01388-201ENST00000416242 NOX1Q9Y5S8 564 aa12.53□□□□□ -0.4
LINC01388-201ENST00000416242 CPSF4LA6NMK7 179 aaKnown RBP12.52□□□□□ -0.41
LINC01388-201ENST00000416242 RPL36A-HNRNPH2H7BZ11 118 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 ZNF432O94892 652 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 BGLAPP02818 100 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 CD40P25942 277 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 IFNA8P32881 189 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 PTH2RP49190 550 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 CDH11P55287 796 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 RIPPLY3P57055 190 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 UBE2NP61088 152 aaKnown RBP12.52□□□□□ -0.41
LINC01388-201ENST00000416242 SF3A3Q12874 501 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC01388-201ENST00000416242 PMS2P3Q13401 168 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 NPTX1Q15818 432 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 ETFDHQ16134 617 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 LINC00114Q6XXX2 140 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 PXKQ7Z7A4 578 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 GPR137CQ8N3F9 429 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 WFDC11Q8NEX6 87 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 KBTBD8Q8NFY9 601 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 VANGL1Q8TAA9 524 aaPredicted RBP12.52□□□□□ -0.41
LINC01388-201ENST00000416242 MAGEE2Q8TD90 523 aaPredicted RBP12.52□□□□□ -0.41
LINC01388-201ENST00000416242 SMAP2Q8WU79 429 aaPredicted RBP12.52□□□□□ -0.41
LINC01388-201ENST00000416242 LZICQ8WZA0 190 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 GTPBP3Q969Y2 492 aaKnown RBP12.52□□□□□ -0.41
LINC01388-201ENST00000416242 RCN3Q96D15 328 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 CMTM5Q96DZ9 223 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 TRMT61AQ96FX7 289 aaKnown RBP12.52□□□□□ -0.41
LINC01388-201ENST00000416242 PERPQ96FX8 193 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 ALKBH3Q96Q83 286 aaPredicted RBP12.52□□□□□ -0.41
LINC01388-201ENST00000416242 WFDC6Q9BQY6 131 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 ZNF426Q9BUY5 554 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 PRR14Q9BWN1 585 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 ALG2Q9H553 416 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 FKRPQ9H9S5 495 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 EFCAB1Q9HAE3 211 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 NPAP1Q9NZP6 1156 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 LAMP3Q9UQV4 416 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 SH3GLB1Q9Y371 365 aa12.52□□□□□ -0.41
LINC01388-201ENST00000416242 PRRC2AP48634 2157 aaKnown RBP12.52□□□□□ -0.41
LINC01388-201ENST00000416242 ELOVL7A1L3X0 281 aa12.51□□□□□ -0.41
LINC01388-201ENST00000416242 FAM171A2A8MVW0 826 aa12.51□□□□□ -0.41
LINC01388-201ENST00000416242 TRAF3IP2O43734 574 aaPredicted RBP12.51□□□□□ -0.41
LINC01388-201ENST00000416242 OR5F1O95221 314 aa12.51□□□□□ -0.41
LINC01388-201ENST00000416242 OR6A2O95222 327 aa12.51□□□□□ -0.41
LINC01388-201ENST00000416242 IGF2P01344 180 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms