RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 RP1L1Q8IWN7 2480 aaPredicted RBP11.87□□□□□ -0.51
CNN3-203ENST00000415017 IGKV3D-15A0A087WSY6 115 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 TRAV27A0A087WT01 109 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 CD8B2A6NJW9 211 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 TTLL8A6PVC2 850 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 NPIPA2E9PIF3 369 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 NPIPA3F8WFD2 350 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 BHLHE40O14503 412 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 SLC16A6O15403 523 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 SEC14L5O43304 696 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 AKR7A3O95154 331 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 RCBTB2O95199 551 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 TXNDC12O95881 172 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 IGHMP01871 453 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 IGFBP1P08833 259 aaPredicted RBP11.86□□□□□ -0.51
CNN3-203ENST00000415017 HOXD4P09016 255 aaPredicted RBP11.86□□□□□ -0.51
CNN3-203ENST00000415017 SAGP10523 405 aaPredicted RBP11.86□□□□□ -0.51
CNN3-203ENST00000415017 APEHP13798 732 aaKnown RBP11.86□□□□□ -0.51
CNN3-203ENST00000415017 ENPP1P22413 925 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 EPHA2P29317 976 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 PTGER4P35408 488 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 EIF1AXP47813 144 aaKnown RBP11.86□□□□□ -0.51
CNN3-203ENST00000415017 CRISP1P54107 249 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 OR2B6P58173 313 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 EFNB1P98172 346 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 CDK5Q00535 292 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 RPL18Q07020 188 aaKnown RBP11.86□□□□□ -0.51
CNN3-203ENST00000415017 NPRL3Q12980 569 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 SLC17A1Q14916 467 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 GUSBP1Q15486 140 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 SNCBQ16143 134 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 C3AR1Q16581 482 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 LRRC36Q1X8D7 754 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 WLSQ5T9L3 541 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 RTL6Q6ICC9 239 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 PXKQ7Z7A4 578 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 OR51A7Q8NH64 312 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 MOSPD2Q8NHP6 518 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 CPT1CQ8TCG5 803 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 SMPDL3BQ92485 455 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 ASPNQ9BXN1 380 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 EGLN3Q9H6Z9 239 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 EXO5Q9H790 373 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 CALHM2Q9HA72 323 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 SLC25A19Q9HC21 320 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 GP6Q9HCN6 339 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 PNPLA3Q9NST1 481 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 SMPD3Q9NY59 655 aaPredicted RBP11.86□□□□□ -0.51
CNN3-203ENST00000415017 ENOPH1Q9UHY7 261 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 RASD1Q9Y272 281 aa11.86□□□□□ -0.51
CNN3-203ENST00000415017 FAM208BQ5VWN6 2430 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 ZAR1LA6NP61 321 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 CLCA1A8K7I4 914 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 ARPC3O15145 178 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 ZNHIT1O43257 154 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 TRAF3IP2O43734 574 aaPredicted RBP11.85□□□□□ -0.51
CNN3-203ENST00000415017 WDR1O75083 606 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 NDUFB2O95178 105 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 SNAP29O95721 258 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 GABRA1P14867 456 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 POLR2IP36954 125 aaKnown RBP11.85□□□□□ -0.51
CNN3-203ENST00000415017 AQP2P41181 271 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 GIPRP48546 466 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 RAD23AP54725 363 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 MLLT10P55197 1068 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 NUP107P57740 925 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 ADARB1P78563 741 aaKnown RBP11.85□□□□□ -0.51
CNN3-203ENST00000415017 PUDPQ08623 228 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 NFATC3Q12968 1075 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 PMS2P3Q13401 168 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 SLC36A3Q495N2 470 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 ACSF3Q4G176 576 aaPredicted RBP11.85□□□□□ -0.51
CNN3-203ENST00000415017 ZNF362Q5T0B9 420 aaPredicted RBP11.85□□□□□ -0.51
CNN3-203ENST00000415017 NSUN5P2Q63ZY6 315 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 DPY19L2P2Q6ZN68 376 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 FAM122BQ7Z309 247 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 NANOGNBQ7Z5D8 188 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 CCDC103Q8IW40 242 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 LNX2Q8N448 690 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 ZIC4Q8N9L1 334 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 DNAJA3Q96EY1 480 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 HRASLS5Q96KN8 279 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 OXGR1Q96P68 337 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 PITX2Q99697 317 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 NAA11Q9BSU3 229 aaPredicted RBP11.85□□□□□ -0.51
CNN3-203ENST00000415017 VCX3BQ9H321 246 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 KIF17Q9P2E2 1029 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 CAMK2AQ9UQM7 478 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 FAM215AQ9Y5M1 114 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 FREM1Q5H8C1 2179 aa11.85□□□□□ -0.51
CNN3-203ENST00000415017 INTS1Q8N201 2190 aaKnown RBP11.84□□□□□ -0.51
CNN3-203ENST00000415017 MBD3L4A6NDZ8 208 aaPredicted RBP11.84□□□□□ -0.51
CNN3-203ENST00000415017 MBD3L3A6NE82 208 aaPredicted RBP11.84□□□□□ -0.51
CNN3-203ENST00000415017 MBD3L5A6NJ08 208 aaPredicted RBP11.84□□□□□ -0.51
CNN3-203ENST00000415017 MCIDASD6RGH6 385 aa11.84□□□□□ -0.51
CNN3-203ENST00000415017 IMPA2O14732 288 aa11.84□□□□□ -0.51
CNN3-203ENST00000415017 AQP8O94778 261 aa11.84□□□□□ -0.51
CNN3-203ENST00000415017 TGM6O95932 706 aa11.84□□□□□ -0.51
CNN3-203ENST00000415017 HIST1H2ABP04908 130 aa11.84□□□□□ -0.51
CNN3-203ENST00000415017 CD14P08571 375 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms