RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 HAS2Q92819 552 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 DNAJA3Q96EY1 480 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 NUAK2Q9H093 628 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 ANKRD19PQ9H560 264 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 MED17Q9NVC6 651 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 PEX16Q9Y5Y5 336 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 ZNF407Q9C0G0 2248 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 A0A087WUJ7 227 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 LRRC3CA6NJW4 275 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 RFPL3SP0C7P2 107 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 DBTP11182 482 aaKnown RBP14.05□□□□□ -0.16
SHMT2-202ENST00000414700 EPHA2P29317 976 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 PLPPR5Q32ZL2 321 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 OR4K17Q8NGC6 315 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 OR1J4Q8NGS1 313 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 FAM46AQ96IP4 442 aaKnown RBP14.05□□□□□ -0.16
SHMT2-202ENST00000414700 APOL4Q9BPW4 351 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 DHRS9Q9BPW9 319 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 RYDENQ9NUL5 291 aaKnown RBP14.05□□□□□ -0.16
SHMT2-202ENST00000414700 KIF17Q9P2E2 1029 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 DNAJC13O75165 2243 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 ITPR1Q14643 2758 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 IGKV1D-42A0A075B6H8 117 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 LCKP06239 509 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 GP1BBP13224 206 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 FUT1P19526 365 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 CNR1P21554 472 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 MSX1P28360 303 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 FOXO1Q12778 655 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 FOXF1Q12946 379 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 GPR50Q13585 617 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 IGFL2Q6UWQ7 119 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 UNQ6494/PRO21346Q6UXR6 183 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 GALNTL5Q7Z4T8 443 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 SULF2Q8IWU5 870 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 C1GALT1C1Q96EU7 318 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 TMEM41AQ96HV5 264 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 CCDC32Q9BV29 185 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 CDADC1Q9BWV3 514 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.04□□□□□ -0.16
SHMT2-202ENST00000414700 RIBC2Q9H4K1 309 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 RNF6Q9Y252 685 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 ACACBO00763 2458 aa14.04□□□□□ -0.16
SHMT2-202ENST00000414700 ZSCAN5BA6NJL1 495 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 ERVH48-1M5A8F1 160 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 SSX4O60224 188 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 M6PRP20645 277 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 IL11P20809 199 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 GPR4P46093 362 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 OMPP47874 163 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 TNFSF10P50591 281 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 SUMO3P55854 103 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-202ENST00000414700 EGR4Q05215 589 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 YIF1BQ5BJH7 314 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 MBOAT2Q6ZWT7 520 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 POC1BQ8TC44 478 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 RNF170Q96K19 258 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 SIGLEC11Q96RL6 698 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 RNF32Q9H0A6 362 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 KRT84Q9NSB2 600 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 PAQR5Q9NXK6 330 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-202ENST00000414700 RPH3AQ9Y2J0 694 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-202ENST00000414700 GMPPBQ9Y5P6 360 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 ZC3H12DA2A288 527 aaKnown RBP14.03□□□□□ -0.16
SHMT2-202ENST00000414700 ARRDC5A6NEK1 342 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 ELOA3DA6NLF2 546 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-202ENST00000414700 LRRN3E7EW58 273 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 K7EM74 188 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 CDC42EP2O14613 210 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 EFNA2O43921 213 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 PDGFAP04085 211 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 SP1P08047 785 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 ANXA8P13928 327 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 LIPAP38571 399 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 ZNF41P51814 821 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-202ENST00000414700 MAD2L1BPQ15013 274 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-202ENST00000414700 ELOA3BQ3SY89 546 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 NXNL2Q5VZ03 156 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 C1orf94Q6P1W5 598 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 KLHL17Q6TDP4 642 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 RRM2BQ7LG56 351 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 GRINAQ7Z429 371 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 ADGRG3Q86Y34 549 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 ELMOD2Q8IZ81 293 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 SLC38A6Q8IZM9 456 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 ELOA3Q8NG57 546 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 OR2M7Q8NG81 312 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 SETD6Q8TBK2 473 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 DMRTB1Q96MA1 342 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 UBL7Q96S82 380 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-202ENST00000414700 SMAD5Q99717 465 aaKnown RBP14.03□□□□□ -0.16
SHMT2-202ENST00000414700 RHNO1Q9BSD3 238 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 BOLA1Q9Y3E2 137 aa14.03□□□□□ -0.16
SHMT2-202ENST00000414700 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 HMX3A6NHT5 357 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 NME2P1O60361 137 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 YES1P07947 543 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 IGFBP1P08833 259 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-202ENST00000414700 MAKP20794 623 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 NME2P22392 152 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms