RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 DEFB113Q30KQ7 82 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 NCMAPQ5T1S8 102 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 NIPAL3Q6P499 406 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 WDR88Q6ZMY6 472 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 H1FNTQ75WM6 255 aaPredicted RBP16.58■□□□□ 0.24
TRIM56-202ENST00000412507 CARM1Q86X55 608 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 OXGR1Q96P68 337 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 TMEM204Q9BSN7 226 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 CXXC4Q9H2H0 198 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 B3GAT1Q9P2W7 334 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 BAG5Q9UL15 447 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 SLC7A7Q9UM01 511 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 B3GALT5Q9Y2C3 310 aa16.58■□□□□ 0.24
TRIM56-202ENST00000412507 A0A1W2PR80 420 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 TRAPPC13A5PLN9 417 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 NME4O00746 187 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 SHOX2O60902 331 aaPredicted RBP16.57■□□□□ 0.24
TRIM56-202ENST00000412507 IFNA14P01570 189 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 ZNF43P17038 809 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 NUDT2P50583 147 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 SLC7A2P52569 658 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 CLDN17P56750 224 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 IL1RL1Q01638 556 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 LIPEQ05469 1076 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 LGALS3BPQ08380 585 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 MFSD13AQ14CX5 517 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 CYBRD1Q53TN4 286 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 P2RY8Q86VZ1 359 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 C10orf53Q8N6V4 93 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 POMGNT2Q8NAT1 580 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 OR6S1Q8NH40 331 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 OR52N5Q8NH56 324 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 MUS81Q96NY9 551 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 MOGAT1Q96PD6 335 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 ALPK1Q96QP1 1244 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 HOPXQ9BPY8 73 aaPredicted RBP16.57■□□□□ 0.24
TRIM56-202ENST00000412507 PCDHAC1Q9H158 963 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 ESRP2Q9H6T0 727 aaKnown RBP16.57■□□□□ 0.24
TRIM56-202ENST00000412507 FAM53CQ9NYF3 392 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 NPAP1Q9NZP6 1156 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 AP3M1Q9Y2T2 418 aa16.57■□□□□ 0.24
TRIM56-202ENST00000412507 FLNAP21333 2647 aaKnown RBP16.56■□□□□ 0.24
TRIM56-202ENST00000412507 USF3Q68DE3 2245 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 DPRXA6NFQ7 191 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 MS4A18H0YCH9 400 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 CLOCKO15516 846 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 CD3EP07766 207 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 NQO1P15559 274 aaKnown RBP16.56■□□□□ 0.24
TRIM56-202ENST00000412507 OR1E2P47887 323 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 BSPH1Q075Z2 132 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 C1DQ13901 141 aaKnown RBP16.56■□□□□ 0.24
TRIM56-202ENST00000412507 MS4A18Q3C1V0 323 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 OR7E24Q6IFN5 339 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 C8orf82Q6P1X6 216 aaPredicted RBP16.56■□□□□ 0.24
TRIM56-202ENST00000412507 TTC33Q6PID6 262 aaPredicted RBP16.56■□□□□ 0.24
TRIM56-202ENST00000412507 HACD2Q6Y1H2 254 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 DEF8Q6ZN54 512 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 ADPRHL1Q8NDY3 354 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 CMTM5Q96DZ9 223 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 SLC41A3Q96GZ6 507 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 ASPNQ9BXN1 380 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 RNF115Q9Y4L5 304 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 CORINQ9Y5Q5 1042 aa16.56■□□□□ 0.24
TRIM56-202ENST00000412507 KRT33AO76009 404 aa16.55■□□□□ 0.24
TRIM56-202ENST00000412507 HPRP00739 348 aa16.55■□□□□ 0.24
TRIM56-202ENST00000412507 CDH2P19022 906 aaPredicted RBP16.55■□□□□ 0.24
TRIM56-202ENST00000412507 MPGP29372 298 aa16.55■□□□□ 0.24
TRIM56-202ENST00000412507 PMS2P3Q13401 168 aa16.55■□□□□ 0.24
TRIM56-202ENST00000412507 C20orf204Q6ZNR8 217 aa16.55■□□□□ 0.24
TRIM56-202ENST00000412507 AKAP1Q92667 903 aaKnown RBP eCLIP16.55■□□□□ 0.241e-11■■□□□ 12.3
TRIM56-202ENST00000412507 TPD52L3Q96J77 140 aa16.55■□□□□ 0.24
TRIM56-202ENST00000412507 CCL19Q99731 98 aa16.55■□□□□ 0.24
TRIM56-202ENST00000412507 PRSS27Q9BQR3 290 aa16.55■□□□□ 0.24
TRIM56-202ENST00000412507 AMBRA1Q9C0C7 1298 aa16.55■□□□□ 0.24
TRIM56-202ENST00000412507 SLC25A15Q9Y619 301 aa16.55■□□□□ 0.24
TRIM56-202ENST00000412507 ZNF469Q96JG9 3925 aaPredicted RBP16.54■□□□□ 0.24
TRIM56-202ENST00000412507 ACANP16112 2415 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 KPNA4O00629 521 aaPredicted RBP16.54■□□□□ 0.24
TRIM56-202ENST00000412507 TRAF3IP2O43734 574 aaPredicted RBP16.54■□□□□ 0.24
TRIM56-202ENST00000412507 UPK3AO75631 287 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 ZNF432O94892 652 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 HLA-DOBP13765 273 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 PRDX6P30041 224 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 GSK3BP49841 420 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 TAS2R41P59536 307 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 TGFBR3Q03167 851 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 LINGO2Q7L985 606 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 SSX8Q7RTT4 187 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 ABHD12BQ7Z5M8 362 aaPredicted RBP16.54■□□□□ 0.24
TRIM56-202ENST00000412507 SCAIQ8N9R8 606 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 WDR31Q8NA23 367 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 C1orf162Q8NEQ5 155 aaPredicted RBP16.54■□□□□ 0.24
TRIM56-202ENST00000412507 LILRB1Q8NHL6 650 aaPredicted RBP16.54■□□□□ 0.24
TRIM56-202ENST00000412507 NEUROG1Q92886 237 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 MPP4Q96JB8 637 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 ALKBH3Q96Q83 286 aaPredicted RBP16.54■□□□□ 0.24
TRIM56-202ENST00000412507 SLC17A5Q9NRA2 495 aa16.54■□□□□ 0.24
TRIM56-202ENST00000412507 BEX4Q9NWD9 120 aaPredicted RBP16.54■□□□□ 0.24
TRIM56-202ENST00000412507 MRPL39Q9NYK5 338 aaKnown RBP16.54■□□□□ 0.24
TRIM56-202ENST00000412507 RCE1Q9Y256 329 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms