RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 CCL17Q92583 94 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 MARS2Q96GW9 593 aaKnown RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 AMDHD1Q96NU7 426 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 ZNF385AQ96PM9 386 aaKnown RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 ALKBH3Q96Q83 286 aaPredicted RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 NAA11Q9BSU3 229 aaPredicted RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 THUMPD3Q9BV44 507 aaKnown RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 HOXD1Q9GZZ0 328 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 NELFAQ9H3P2 528 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 MIEF1Q9NQG6 463 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 DECR2Q9NUI1 292 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 GIN1Q9NXP7 522 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 SLAMF8Q9P0V8 285 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 TAAR3PQ9P1P4 343 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 TXNDC16Q9P2K2 825 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 SNX6Q9UNH7 406 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 POLR3KQ9Y2Y1 108 aaPredicted RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 HDGFL3Q9Y3E1 203 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 CACNG2Q9Y698 323 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 POMT1Q9Y6A1 747 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 TEX264Q9Y6I9 313 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 LCE6AA0A183 80 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 PGRMC1O00264 195 aaKnown RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 GPR137BO60478 399 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 EIF4E2O60573 245 aaKnown RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 CYP7B1O75881 506 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 ZNF432O94892 652 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 MELTFP08582 738 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 IFI6P09912 130 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 PPIAL4GP0DN37 164 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 UBL4AP11441 157 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 BCKDHAP12694 445 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 IVDP26440 423 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 FKBP2P26885 142 aaKnown RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 CD80P33681 288 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 APOBEC1P41238 236 aaKnown RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 GSTM5P46439 218 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 CAPZA2P47755 286 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 CLK1P49759 484 aaKnown RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 SELENOVP59797 346 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 RPS23P62266 143 aaKnown RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 SLC35A1P78382 337 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 GALK2Q01415 458 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 PAX8Q06710 450 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 SLC3A1Q07837 685 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 C2orf80Q0P641 193 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 DBPQ10586 325 aaPredicted RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 HSPB3Q12988 150 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 LCP2Q13094 533 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 TRAF3Q13114 568 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 TRMT5Q32P41 509 aaKnown RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 GGTA1PQ4G0N0 100 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 CASC10Q5T4H9 136 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 BRD3OSQ6XYD6 125 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 Q6ZSV7 163 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 TMEM139Q8IV31 216 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 ZIC4Q8N9L1 334 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 ZSCAN4Q8NAM6 433 aaPredicted RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 OR10S1Q8NGN2 331 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 CDC26Q8NHZ8 85 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 RHEBL1Q8TAI7 183 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 TBC1D15Q8TC07 691 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 SNX33Q8WV41 574 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 UPRTQ96BW1 309 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 OTUB1Q96FW1 271 aaPredicted RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 CHMP6Q96FZ7 201 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 PBKQ96KB5 322 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 FAM71F1Q96KD3 344 aaPredicted RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 GPR22Q99680 433 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 B9D2Q9BPU9 175 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 OR11A1Q9GZK7 315 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 LAT2Q9GZY6 243 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 HINT3Q9NQE9 182 aaKnown RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 NKIRAS2Q9NYR9 191 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 GRHL1Q9NZI5 618 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 TMEM181Q9P2C4 612 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 CPSF2Q9P2I0 782 aaKnown RBP5.33□□□□□ -1.56
LINC00396-201ENST00000411690 CHRNA9Q9UGM1 479 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 GPR160Q9UJ42 338 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 TRAPPC4Q9Y296 219 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 DTNAQ9Y4J8 743 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 COL7A1Q02388 2944 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 TENM2Q9NT68 2774 aa5.33□□□□□ -1.56
LINC00396-201ENST00000411690 DSPPQ9NZW4 1301 aa5.32□□□□□ -1.56
LINC00396-201ENST00000411690 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.32□□□□□ -1.56
LINC00396-201ENST00000411690 TMEM238LA0A1B0GVL6 79 aa5.32□□□□□ -1.56
LINC00396-201ENST00000411690 DNALI1O14645 258 aaPredicted RBP5.32□□□□□ -1.56
LINC00396-201ENST00000411690 ANKRD28O15084 1053 aa5.32□□□□□ -1.56
LINC00396-201ENST00000411690 ZSCAN12O43309 604 aa5.32□□□□□ -1.56
LINC00396-201ENST00000411690 UPK3AO75631 287 aa5.32□□□□□ -1.56
LINC00396-201ENST00000411690 RSL1D1O76021 490 aaKnown RBP5.32□□□□□ -1.56
LINC00396-201ENST00000411690 ANXA4P09525 319 aaPredicted RBP5.32□□□□□ -1.56
LINC00396-201ENST00000411690 ZNF35P13682 527 aa5.32□□□□□ -1.56
LINC00396-201ENST00000411690 CHN1P15882 459 aa5.32□□□□□ -1.56
LINC00396-201ENST00000411690 SLC6A9P48067 706 aa5.32□□□□□ -1.56
LINC00396-201ENST00000411690 SELENOPP49908 381 aa5.32□□□□□ -1.56
LINC00396-201ENST00000411690 ATP12AP54707 1039 aa5.32□□□□□ -1.56
LINC00396-201ENST00000411690 SH3BGRP55822 239 aaPredicted RBP5.32□□□□□ -1.56
LINC00396-201ENST00000411690 ROR2Q01974 943 aaKnown RBP5.32□□□□□ -1.56
LINC00396-201ENST00000411690 EGR3Q06889 387 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms