RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 ARL13AQ5H913 290 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 LYPLAL1Q5VWZ2 237 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 BAGE3Q86Y29 109 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 BAGE2Q86Y30 109 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 DND1Q8IYX4 353 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 TMEM156Q8N614 296 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 TP53I13Q8NBR0 393 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 OR5AN1Q8NGI8 311 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 MRGPRFQ96AM1 343 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 OR5M11Q96RB7 305 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 STRADBQ9C0K7 418 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 CDC42EP4Q9H3Q1 356 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 PRDM12Q9H4Q4 367 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 HRASLSQ9HDD0 168 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 LTB4R2Q9NPC1 389 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 ZNF331Q9NQX6 463 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 FLRT3Q9NZU0 649 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 COL20A1Q9P218 1284 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 SCML2Q9UQR0 700 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 ZNF835Q9Y2P0 537 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 CARMIL3Q8ND23 1372 aa4.87□□□□□ -1.63
R3HDM1-204ENST00000410054 PPRC1Q5VV67 1664 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 A0A1W2PQH9 124 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 SLC22A31A6NKX4 558 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 FAM171A2A8MVW0 826 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 SGPL1O95470 568 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 JCHAINP01591 159 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 CD99P14209 185 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 ACKR3P25106 362 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 PSMB10P40306 273 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 PBX1P40424 430 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 GSK3BP49841 420 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 GPM6AP51674 278 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 PNOCQ13519 176 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 ZNF266Q14584 549 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 MFSD14BQ5SR56 506 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 TFAP2EQ6VUC0 442 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 LRRC28Q86X40 367 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 CNTN4Q8IWV2 1026 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 ZNF808Q8N4W9 903 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 OR52N4Q8NGI2 321 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 OR1L6Q8NGR2 347 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 OR1N1Q8NGS0 311 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 OR6K2Q8NGY2 324 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 PPTC7Q8NI37 304 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 DOK4Q8TEW6 326 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 SDR42E1Q8WUS8 393 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 MS4A3Q96HJ5 214 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 FCRL1Q96LA6 429 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 JSRP1Q96MG2 331 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 PAAF1Q9BRP4 392 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 UBE2ZQ9H832 354 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 SRD5A3Q9H8P0 318 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 CYSLTR1Q9Y271 337 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 IQGAP1P46940 1657 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 TRBV7-9A0A0J9YWB2 115 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 FCN1O00602 326 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 ZNF217O75362 1048 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 TCRBP04435 133 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 TPT1P13693 172 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 ICAM3P32942 547 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 LGALS4P56470 323 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 TPPP2P59282 170 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 UBE2MP61081 183 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 HSD11B2P80365 405 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 NOGQ13253 232 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 HIST2H2ACQ16777 129 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 FAM98CQ17RN3 349 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 RPEL1Q2QD12 228 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 SNAI3Q3KNW1 292 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 TMEM236Q5W0B7 351 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 CPZQ66K79 652 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 PAQR3Q6TCH7 311 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 NUFIP2Q7Z417 695 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 FAM219AQ8IW50 185 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 PI4KAP1Q8N8J0 262 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 OR10G3Q8NGC4 313 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 SETD7Q8WTS6 366 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 LHX4Q969G2 390 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 TMEM19Q96HH6 336 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 CSTL1Q9H114 145 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 MIXL1Q9H2W2 232 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 MAP1LC3AQ9H492 121 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 CSNK1G1Q9HCP0 422 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 DECR2Q9NUI1 292 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 ASB6Q9NWX5 421 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 USP21Q9UK80 565 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 COLQQ9Y215 455 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 RFX7Q2KHR2 1363 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 KIAA0232Q92628 1395 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 KLRG2A4D1S0 409 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 FAM181BA6NEQ2 426 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 FABP7O15540 132 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 SCELO95171 688 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 TSPAN12O95859 305 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 TFP02787 698 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 CD14P08571 375 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 ADORA3P0DMS8 318 aa4.86□□□□□ -1.63
R3HDM1-204ENST00000410054 SRFP11831 508 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms