RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 HSH2DQ96JZ2 352 aa27.5■■□□□ 1.99
TRAF3IP1-203ENST00000409739 OXGR1Q96P68 337 aa27.5■■□□□ 1.99
TRAF3IP1-203ENST00000409739 ASPNQ9BXN1 380 aa27.5■■□□□ 1.99
TRAF3IP1-203ENST00000409739 SLC19A3Q9BZV2 496 aa27.5■■□□□ 1.99
TRAF3IP1-203ENST00000409739 AMBRA1Q9C0C7 1298 aa27.5■■□□□ 1.99
TRAF3IP1-203ENST00000409739 SLC7A10Q9NS82 523 aa27.5■■□□□ 1.99
TRAF3IP1-203ENST00000409739 ASB6Q9NWX5 421 aa27.5■■□□□ 1.99
TRAF3IP1-203ENST00000409739 KPNA4O00629 521 aaPredicted RBP27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 MT-ATP6P00846 226 aa27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 FXNQ16595 210 aa27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 IFI44LQ53G44 452 aa27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 SAMD4BQ5PRF9 694 aaKnown RBP27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 TSPO2Q5TGU0 170 aa27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 NKAIN4Q8IVV8 208 aa27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 DEFB107AQ8IZN7 70 aa27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 ZNF433Q8N7K0 673 aaPredicted RBP27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 NRGNQ92686 78 aa27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 PRRC1Q96M27 445 aa27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 CDRT15Q96T59 188 aa27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 MRPL39Q9NYK5 338 aaKnown RBP27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 CD300AQ9UGN4 299 aa27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 A4GNTQ9UNA3 340 aa27.49■■□□□ 1.99
TRAF3IP1-203ENST00000409739 IFNW1P05000 195 aa27.48■■□□□ 1.99
TRAF3IP1-203ENST00000409739 NQO1P15559 274 aaKnown RBP27.48■■□□□ 1.99
TRAF3IP1-203ENST00000409739 ZNF43P17038 809 aa27.48■■□□□ 1.99
TRAF3IP1-203ENST00000409739 TCN1P20061 433 aaPredicted RBP27.48■■□□□ 1.99
TRAF3IP1-203ENST00000409739 MNAT1P51948 309 aa27.48■■□□□ 1.99
TRAF3IP1-203ENST00000409739 FAPQ12884 760 aa27.48■■□□□ 1.99
TRAF3IP1-203ENST00000409739 ZNF74Q16587 644 aa27.48■■□□□ 1.99
TRAF3IP1-203ENST00000409739 GLYATQ6IB77 296 aa27.48■■□□□ 1.99
TRAF3IP1-203ENST00000409739 RBM15BQ8NDT2 890 aaKnown RBP27.48■■□□□ 1.99
TRAF3IP1-203ENST00000409739 NSL1Q96IY1 281 aa27.48■■□□□ 1.99
TRAF3IP1-203ENST00000409739 SLCO5A1Q9H2Y9 848 aa27.48■■□□□ 1.99
TRAF3IP1-203ENST00000409739 SNX13Q9Y5W8 968 aa27.48■■□□□ 1.99
TRAF3IP1-203ENST00000409739 A0A1W2PPR1 153 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 MS4A18H0YCH9 400 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 PDLIM1O00151 329 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 HPRP00739 348 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 THRBP10828 461 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 SELENOPP49908 381 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 UGT2B15P54855 530 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 FOXG1P55316 489 aaPredicted RBP27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 MS4A18Q3C1V0 323 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 CDH24Q86UP0 819 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 WFDC8Q8IUA0 241 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 BCAS4Q8TDM0 211 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 TMEM255BQ8WV15 326 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 MEPEQ9NQ76 525 aaPredicted RBP27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 TAS2R16Q9NYV7 291 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 UPB1Q9UBR1 384 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 RPS6KA6Q9UK32 745 aa27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 RAI1Q7Z5J4 1906 aaPredicted RBP27.47■■□□□ 1.99
TRAF3IP1-203ENST00000409739 MYO9AB2RTY4 2548 aa27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 LOC102725191A0A1B0GVB3 256 aa27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 TRAF3IP2O43734 574 aaPredicted RBP27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 CH25HO95992 272 aa27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 ITGA5P08648 1049 aa27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 DNAJA1P31689 397 aaKnown RBP27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 RBM34P42696 430 aaKnown RBP27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 CLDN17P56750 224 aa27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 IL1RL1Q01638 556 aa27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 PMS2P3Q13401 168 aa27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 TAB1Q15750 504 aa27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 FKBP9P1Q75LS8 142 aa27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 PIK3IP1Q96FE7 263 aa27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 FKRPQ9H9S5 495 aa27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 CCDC168Q8NDH2 2452 aa27.46■■□□□ 1.99
TRAF3IP1-203ENST00000409739 B2RBV5 119 aa27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 KLF4O43474 513 aa27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 RAD51DO75771 328 aa27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 LOXP28300 417 aaPredicted RBP27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 YAP1P46937 504 aaKnown RBP27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 PUDPQ08623 228 aa27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 C1DQ13901 141 aaKnown RBP27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 NIPAL3Q6P499 406 aa27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 POMGNT2Q8NAT1 580 aa27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 OR5J2Q8NH18 312 aa27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 USB1Q9BQ65 265 aaKnown RBP27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 DCAF13Q9NV06 445 aaKnown RBP27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 RCE1Q9Y256 329 aa27.45■■□□□ 1.98
TRAF3IP1-203ENST00000409739 ROS1P08922 2347 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 ENO4A6NNW6 628 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 J3KTA2 159 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 PLPP3O14495 311 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 GMNNO75496 209 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 FUT4P22083 530 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 CALB2P22676 271 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 MSX2P35548 267 aaPredicted RBP27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 LGALS3BPQ08380 585 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 ST3GAL3Q11203 375 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 FOXD4Q12950 439 aaPredicted RBP27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 SLC46A3Q7Z3Q1 461 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 UEVLDQ8IX04 471 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 OFCC1Q8IZS5 231 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 PFN4Q8NHR9 129 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 TMEM239Q8WW34 195 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 HSD17B8Q92506 261 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 HS3ST6Q96QI5 342 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 GORASP2Q9H8Y8 452 aa27.44■■□□□ 1.98
TRAF3IP1-203ENST00000409739 NANSQ9NR45 359 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms