RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TPD52L1Q16890 204 aaPredicted RBP2.22□□□□□ -2.05
PMS1-203ENST00000409593 TATDN3Q17R31 274 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 C5orf47Q569G3 176 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 NCR3LG1Q68D85 454 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 LCN12Q6JVE5 192 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 PYHIN1Q6K0P9 492 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 ZNF546Q86UE3 836 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 KIR2DL5AQ8N109 375 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 ZNF709Q8N972 641 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 UBALD1Q8TB05 177 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 MAIP1Q8WWC4 291 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 EXOSC8Q96B26 276 aaKnown RBP2.22□□□□□ -2.05
PMS1-203ENST00000409593 PELI1Q96FA3 418 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 ZNF578Q96N58 590 aaPredicted RBP2.22□□□□□ -2.05
PMS1-203ENST00000409593 SPIN2AQ99865 258 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 OMDQ99983 421 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 SPIN2BQ9BPZ2 258 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 RIOK1Q9BRS2 568 aaKnown RBP2.22□□□□□ -2.05
PMS1-203ENST00000409593 ING2Q9H160 280 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 THUMPD1Q9NXG2 353 aaKnown RBP2.22□□□□□ -2.05
PMS1-203ENST00000409593 AURKCQ9UQB9 309 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 YTHDF2Q9Y5A9 579 aaKnown RBP2.22□□□□□ -2.05
PMS1-203ENST00000409593 NUP214P35658 2090 aaPredicted RBP2.22□□□□□ -2.05
PMS1-203ENST00000409593 COL1A2P08123 1366 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 KDRP35968 1356 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 CABIN1Q9Y6J0 2220 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 BTN3A3O00478 584 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 B4GALT5O43286 388 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 AP2A1O95782 977 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 IGLV2-23P01705 113 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 IGLV3-19P01714 112 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 IGHG4P01861 327 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 EPB41P11171 864 aaKnown RBP2.22□□□□□ -2.05
PMS1-203ENST00000409593 PCMT1P22061 227 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 HMGB2P26583 209 aaKnown RBP2.22□□□□□ -2.05
PMS1-203ENST00000409593 ACVR1Q04771 509 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 ENPEPQ07075 957 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 C10orf120Q5SQS8 335 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 CCDC80Q76M96 950 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 NLRP9Q7RTR0 991 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 ACOT4Q8N9L9 421 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 DNAJC19Q96DA6 116 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 RNF2Q99496 336 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 SLCO1B3Q9NPD5 702 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 IL26Q9NPH9 171 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 INPP5EQ9NRR6 644 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 GLRX2Q9NS18 164 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 OR12D3Q9UGF7 316 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 PCSK1NQ9UHG2 260 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 OPN4Q9UHM6 478 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 KIF3AQ9Y496 699 aa2.22□□□□□ -2.05
PMS1-203ENST00000409593 TET2Q6N021 2002 aaPredicted RBP2.21□□□□□ -2.06
PMS1-203ENST00000409593 ENTPD5O75356 428 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 ALDOBP05062 364 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 SELPLGQ14242 412 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 SGCAQ16586 387 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 NANOGP8Q6NSW7 305 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 ZSCAN25Q6NSZ9 544 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 SLC25A34Q6PIV7 304 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 CCDC50Q8IVM0 306 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 OR1N2Q8NGR9 330 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 ZFP90Q8TF47 636 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 TM4SF19Q96DZ7 209 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 LINC00477Q96M19 166 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 ECSITQ9BQ95 431 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 NDFIP1Q9BT67 221 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 RAB34Q9BZG1 259 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 ZNF430Q9H8G1 570 aaPredicted RBP2.21□□□□□ -2.06
PMS1-203ENST00000409593 COQ10BQ9H8M1 238 aa2.21□□□□□ -2.06
PMS1-203ENST00000409593 FARSBQ9NSD9 589 aaKnown RBP2.21□□□□□ -2.06
PMS1-203ENST00000409593 PEX7O00628 323 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 SLC31A2O15432 143 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 ATP5LO75964 103 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 OXSR1O95747 527 aaPredicted RBP2.2□□□□□ -2.06
PMS1-203ENST00000409593 PNMTP11086 282 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 CCDC130P13994 396 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 SPIBQ01892 262 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 TNFRSF17Q02223 184 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 MESDQ14696 234 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 GNMTQ14749 295 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 GUCA2BQ16661 112 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 UBE2SQ16763 222 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 CARD16Q5EG05 197 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 Q6ZR03 302 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 C19orf35Q6ZS72 473 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 THOC6Q86W42 341 aaKnown RBP2.2□□□□□ -2.06
PMS1-203ENST00000409593 FAM86B1Q8N7N1 296 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 SYT14Q8NB59 555 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 OR4D5Q8NGN0 318 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 SYNPRQ8TBG9 265 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 ACOT11Q8WXI4 607 aaPredicted RBP2.2□□□□□ -2.06
PMS1-203ENST00000409593 THUMPD2Q9BTF0 503 aaKnown RBP2.2□□□□□ -2.06
PMS1-203ENST00000409593 RIOK2Q9BVS4 552 aaKnown RBP2.2□□□□□ -2.06
PMS1-203ENST00000409593 RANBP3Q9H6Z4 567 aaPredicted RBP2.2□□□□□ -2.06
PMS1-203ENST00000409593 TM9SF3Q9HD45 589 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 TMCO1Q9UM00 188 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 RPH3ALQ9UNE2 315 aa2.2□□□□□ -2.06
PMS1-203ENST00000409593 PRSS37A4D1T9 235 aa2.19□□□□□ -2.06
PMS1-203ENST00000409593 C6orf47O95873 294 aa2.19□□□□□ -2.06
PMS1-203ENST00000409593 ATP6V1C1P21283 382 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms