RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 KLRF1Q9NZS2 232 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 TAAR5O14804 337 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 TMEM225BP0DP42 221 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF44P15621 663 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 POU3F4P49335 361 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 FXYD4P59646 89 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 SHC2P98077 582 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 MARCH8Q5T0T0 291 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 AFMIDQ63HM1 303 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 CSNK1A1LQ8N752 337 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 AVL9Q8NBF6 648 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 TAAR8Q969N4 342 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 OCSTAMPQ9BR26 566 aa16.39■□□□□ 0.21
SMPD4-202ENST00000409031 A0A1B0GUL6 1792 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 TAGLN2P37802 199 aaKnown RBP16.38■□□□□ 0.21
SMPD4-202ENST00000409031 RFX2P48378 723 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 CCNJQ5T5M9 372 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF776Q68DI1 518 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-202ENST00000409031 TMEM255BQ8WV15 326 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 LIN37Q96GY3 246 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-202ENST00000409031 PDCD1LG2Q9BQ51 273 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 PRSS16Q9NQE7 514 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 CPNE7Q9UBL6 633 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 CNTRLQ7Z7A1 2325 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 STK17BO94768 372 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 CMTM4Q8IZR5 234 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 ZC3HAV1LQ96H79 300 aaKnown RBP16.38■□□□□ 0.21
SMPD4-202ENST00000409031 TAF9BQ9HBM6 251 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 EHFQ9NZC4 300 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 WASF3Q9UPY6 502 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 PRRC2BQ5JSZ5 2229 aaKnown RBP16.38■□□□□ 0.21
SMPD4-202ENST00000409031 NFKBIEO00221 500 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 CTRB1P17538 263 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 CX3CR1P49238 355 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 RAB1AP62820 205 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 CTRB2Q6GPI1 263 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 C1orf94Q6P1W5 598 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 TMEM99Q8N816 258 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 OR56B2PQ8NGI1 322 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 IGSF21Q96ID5 467 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 BTF3L4Q96K17 158 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 PTCHD1Q96NR3 888 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 PLEKHJ1Q9NW61 149 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 GPR34Q9UPC5 381 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 RHBDD3Q9Y3P4 386 aa16.38■□□□□ 0.21
SMPD4-202ENST00000409031 HOXA9P31269 272 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 IFITM2Q01629 132 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 SLC14A1Q13336 389 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 RSU1Q15404 277 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 SGCAQ16586 387 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 TMEM41BQ5BJD5 291 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 C9orf62Q8N4C0 152 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 APH1BQ8WW43 257 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 BPNT1O95861 308 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 LPLP06858 475 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 GALP22466 123 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 FAM74A1Q5RGS3 127 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 DPPA4Q7L190 304 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 TM4SF18Q96CE8 201 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 OR11A1Q9GZK7 315 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 H7C1Q1 480 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 PTAFRP25105 342 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 TACR3P29371 465 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF620Q6ZNG0 422 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 Q6ZTK2 550 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 TTLL10Q6ZVT0 673 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 PLPP5Q8NEB5 264 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 DNAJA3Q96EY1 480 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 GLIPR2Q9H4G4 154 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 NCDNQ9UBB6 729 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 ICKQ9UPZ9 632 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 OR6C6A6NF89 314 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 A6NIZ1 184 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 ATG12O94817 140 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 PSMB6P28072 239 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 OR10A3P58181 314 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 RAP1BP61224 184 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 RAP1AP62834 184 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 GLDNQ6ZMI3 551 aaPredicted RBP16.37■□□□□ 0.21
SMPD4-202ENST00000409031 MSRB3Q8IXL7 192 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 FBXL6Q8N531 539 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 AMDHD1Q96NU7 426 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 B3GAT2Q9NPZ5 323 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 ADAMTSL3P82987 1691 aa16.37■□□□□ 0.21
SMPD4-202ENST00000409031 COL14A1Q05707 1796 aaKnown RBP16.37■□□□□ 0.21
SMPD4-202ENST00000409031 TNFP01375 233 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF28P17035 718 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 POU3F3P20264 500 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-202ENST00000409031 MAKP20794 623 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 SOX18P35713 384 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 OR2B8PP59922 312 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 TLE3Q04726 772 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 SLC35D3Q5M8T2 416 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF362Q5T0B9 420 aaPredicted RBP16.36■□□□□ 0.21
SMPD4-202ENST00000409031 C12orf73Q69YU5 71 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 KCNIP4Q6PIL6 250 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 ESPNLQ6ZVH7 1005 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 SPNS2Q8IVW8 549 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 C7orf61Q8IZ16 206 aa16.36■□□□□ 0.21
SMPD4-202ENST00000409031 MIB2Q96AX9 1013 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms