RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 CD28P10747 220 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 ZNF22P17026 224 aaPredicted RBP-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 XBP1P17861 261 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 NMT1P30419 496 aaKnown RBP-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 VDAC2P45880 294 aaPredicted RBP-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 GABRA4P48169 554 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 ACADVLP49748 655 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 ZNF80P51504 273 aaPredicted RBP-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 CEACAM7Q14002 265 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 PPA1Q15181 289 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 P2RY14Q15391 338 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 SGCAQ16586 387 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 RNASE13Q5GAN3 156 aaKnown RBP-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 LYPLAL1Q5VWZ2 237 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 TMIGD1Q6UXZ0 262 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 SLC16A13Q7RTY0 426 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 ZNF546Q86UE3 836 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 PAQR7Q86WK9 346 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 SPATA5Q8NB90 893 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 ABHD3Q8WU67 409 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 BRI3BPQ8WY22 251 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 MR1Q95460 341 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 C11orf24Q96F05 449 aaPredicted RBP-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 TMEM80Q96HE8 168 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 MARVELD1Q9BSK0 173 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 FTOQ9C0B1 505 aaKnown RBP eCLIP-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 ZNF436Q9C0F3 470 aaPredicted RBP-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 VSIRQ9H7M9 311 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 SIAEQ9HAT2 523 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 EHFQ9NZC4 300 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 SARDHQ9UL12 918 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 TBX20Q9UMR3 447 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 SLC9A8Q9Y2E8 581 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 ZFP30Q9Y2G7 519 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 F11RQ9Y624 299 aaKnown RBP-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 AFF2P51816 1311 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 ITIH6Q6UXX5 1313 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 DISP1Q96F81 1524 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 COL4A5P29400 1685 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 LOC285556D6RIA3 1793 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 SLX4Q8IY92 1834 aa-3.3□□□□□ -2.94
MIR548F3-201ENST00000408509 A0A1B0GU33 70 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 C19orf84I3L1E1 186 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 DCTN6O00399 190 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 FFAR1O14842 300 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 TRAPPC3O43617 180 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 PAGE4O60829 102 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 KRT75O95678 551 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 SNRPAP09012 282 aaKnown RBP-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 HPGDP15428 266 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 CTRB1P17538 263 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 GPX2P18283 190 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 EPHX2P34913 555 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 TAS2R31P59538 309 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 TSTA3Q13630 321 aaPredicted RBP-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 DMC1Q14565 340 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 TWISTNBQ3B726 338 aaPredicted RBP-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 DPCR1Q3MIW9 517 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 TEX44Q53QW1 395 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 SPATA31B1PQ5VZV4 182 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 SERPINA9Q86WD7 417 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 NRMQ8IXM6 262 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 OR52J3Q8NH60 311 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 SLAMF9Q96A28 289 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 PRRC1Q96M27 445 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 TRIB3Q96RU7 358 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 SPATA16Q9BXB7 569 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 KLHL4Q9C0H6 718 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 OR52D1Q9H346 318 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 C5orf66Q9H5L9 145 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 ECT2Q9H8V3 914 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 CDH20Q9HBT6 801 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 CTPS2Q9NRF8 586 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 ARHGEF38Q9NXL2 777 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 TXNDC16Q9P2K2 825 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 HMGXB4Q9UGU5 601 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 GLS2Q9UI32 602 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 ACOT9Q9Y305 439 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 PLLPQ9Y342 182 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 TRPV2Q9Y5S1 764 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 MTCH2Q9Y6C9 303 aa-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 USP42Q9H9J4 1324 aaKnown RBP-3.31□□□□□ -2.94
MIR548F3-201ENST00000408509 SHANK3Q9BYB0 1731 aa-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 CACNB4O00305 520 aaPredicted RBP-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 RANBP6O60518 1105 aaKnown RBP-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 TRIM3O75382 744 aaPredicted RBP-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 PALMO75781 387 aa-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 IGHV3-53P01767 116 aa-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 UBTFL6P0CB48 400 aaPredicted RBP-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 ZNF3P17036 446 aa-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 ABCD1P33897 745 aa-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 KPNA2P52292 529 aaKnown RBP-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 TFCP2Q12800 502 aa-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 NDUFA9Q16795 377 aa-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 LRRC75BQ2VPJ9 315 aa-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 PYCR3Q53H96 274 aa-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 COA6Q5JTJ3 125 aaKnown RBP-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 GLYATQ6IB77 296 aa-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 DEGS2Q6QHC5 323 aa-3.32□□□□□ -2.94
MIR548F3-201ENST00000408509 C16orf54Q6UWD8 224 aa-3.32□□□□□ -2.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms