RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 PRAMEF8Q5VWM4 474 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 PRAMEF7Q5VXH5 474 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 ZNF540Q8NDQ6 660 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 BBS10Q8TAM1 723 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 DDIT4LQ96D03 193 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 PRR14Q9BWN1 585 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 RABEP2Q9H5N1 569 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 IFT52Q9Y366 437 aa18.42■□□□□ 0.54
RHBDD3-202ENST00000406335 NBEAL1Q6ZS30 2694 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 LOC390937A0A1W2PQ73 354 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 C5orf58C9J3I9 102 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 ZNF208O43345 1280 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 ITGA5P08648 1049 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 PPIBP23284 216 aaKnown RBP18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 HOXC5Q00444 222 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 SF3A3Q12874 501 aaKnown RBP eCLIP18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 CR1LQ2VPA4 569 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 RETREG3Q86VR2 466 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 C17orf78Q8N4C9 275 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 WDR31Q8NA23 367 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 CPPED1Q9BRF8 314 aaPredicted RBP18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 CACYBPQ9HB71 228 aaKnown RBP18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 SLC17A5Q9NRA2 495 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 MALT1Q9UDY8 824 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 LEF1Q9UJU2 399 aaPredicted RBP18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 TRAPPC4Q9Y296 219 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 GMEB1Q9Y692 573 aa18.41■□□□□ 0.54
RHBDD3-202ENST00000406335 IGHV4-61A0A0C4DH41 118 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 GPX2P18283 190 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 CXCR1P25024 350 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 NTF4P34130 210 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 H3F3AP84243 136 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 CDK6Q00534 326 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 RUNDC3AQ59EK9 446 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 WBP2NLQ6ICG8 309 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 C12orf54Q6X4T0 127 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 COMTD1Q86VU5 262 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 ANKS4BQ8N8V4 417 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 SORCS2Q96PQ0 1159 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 NAA11Q9BSU3 229 aaPredicted RBP18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 TMEM120AQ9BXJ8 343 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 MYOZ1Q9NP98 299 aaPredicted RBP18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 TRIM33Q9UPN9 1127 aa18.4■□□□□ 0.54
RHBDD3-202ENST00000406335 EVPLLA8MZ36 301 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 VWC2LB2RUY7 222 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 DNPH1O43598 174 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 KRT33AO76009 404 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 ETS2P15036 469 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 SERPINF1P36955 418 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 COPZ1P61923 177 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 SLC35A1P78382 337 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 SELPLGQ14242 412 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 ADRM1Q16186 407 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 ZSWIM7Q19AV6 140 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 REEP3Q6NUK4 255 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 VHLLQ6RSH7 139 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 DHDDSQ86SQ9 333 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 RFLNBQ8N5W9 214 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 SIKE1Q9BRV8 207 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 ARMC7Q9H6L4 198 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 FGFR1OP2Q9NVK5 253 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 SLC9A8Q9Y2E8 581 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 NDUFAF1Q9Y375 327 aa18.39■□□□□ 0.53
RHBDD3-202ENST00000406335 TPST1O60507 370 aa18.38■□□□□ 0.53
RHBDD3-202ENST00000406335 CEACAM7Q14002 265 aa18.38■□□□□ 0.53
RHBDD3-202ENST00000406335 SCARB2Q14108 478 aa18.38■□□□□ 0.53
RHBDD3-202ENST00000406335 SWI5Q1ZZU3 235 aa18.38■□□□□ 0.53
RHBDD3-202ENST00000406335 GLIPR1L2Q4G1C9 344 aa18.38■□□□□ 0.53
RHBDD3-202ENST00000406335 CGB2Q6NT52 195 aa18.38■□□□□ 0.53
RHBDD3-202ENST00000406335 DPP10Q8N608 796 aa18.38■□□□□ 0.53
RHBDD3-202ENST00000406335 C1orf162Q8NEQ5 155 aaPredicted RBP18.38■□□□□ 0.53
RHBDD3-202ENST00000406335 TMEM38AQ9H6F2 299 aa18.38■□□□□ 0.53
RHBDD3-202ENST00000406335 SLC7A10Q9NS82 523 aa18.38■□□□□ 0.53
RHBDD3-202ENST00000406335 CORO2BQ9UQ03 480 aa18.38■□□□□ 0.53
RHBDD3-202ENST00000406335 ANGPT2O15123 496 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 ERCC1P07992 297 aaPredicted RBP18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 ZNF23P17027 643 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 AQP1P29972 269 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 MAP2K6P52564 334 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 SLC16A1P53985 500 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 MTPNP58546 118 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 OR7A5Q15622 319 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 MST1LQ2TV78 715 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 TSPO2Q5TGU0 170 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 TMEM99Q8N816 258 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 ANKRD27Q96NW4 1050 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 CGREF1Q99674 301 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 BPESC1Q9GZL8 116 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 RAB1BQ9H0U4 201 aa18.37■□□□□ 0.53
RHBDD3-202ENST00000406335 LIPT2A6NK58 231 aa18.36■□□□□ 0.53
RHBDD3-202ENST00000406335 TMEM229AB2RXF0 380 aa18.36■□□□□ 0.53
RHBDD3-202ENST00000406335 EIF1BO60739 113 aaKnown RBP18.36■□□□□ 0.53
RHBDD3-202ENST00000406335 AKR7A3O95154 331 aa18.36■□□□□ 0.53
RHBDD3-202ENST00000406335 CRYAAP02489 173 aa18.36■□□□□ 0.53
RHBDD3-202ENST00000406335 SLC6A2P23975 617 aa18.36■□□□□ 0.53
RHBDD3-202ENST00000406335 MPGP29372 298 aa18.36■□□□□ 0.53
RHBDD3-202ENST00000406335 PRKAR1BP31321 381 aa18.36■□□□□ 0.53
RHBDD3-202ENST00000406335 SLC25A3Q00325 362 aa18.36■□□□□ 0.53
RHBDD3-202ENST00000406335 METTL21CQ5VZV1 264 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms