RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 AGAP7PQ5VUJ5 663 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 XAF1Q6GPH4 301 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 TUBA3EQ6PEY2 450 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 ZNF843Q8N446 348 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 POC1BQ8TC44 478 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 RORBQ92753 470 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 ABHD17AQ96GS6 310 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 AGAP4Q96P64 663 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 OR11A1Q9GZK7 315 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 HINT3Q9NQE9 182 aaKnown RBP18.94■□□□□ 0.62
TPM1-208ENST00000404484 MRPS18AQ9NVS2 196 aaKnown RBP18.94■□□□□ 0.62
TPM1-208ENST00000404484 MRPL39Q9NYK5 338 aaKnown RBP18.94■□□□□ 0.62
TPM1-208ENST00000404484 TUBD1Q9UJT1 453 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 IER3IP1Q9Y5U9 82 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 CPAMD8Q8IZJ3 1885 aa18.94■□□□□ 0.62
TPM1-208ENST00000404484 OR6A2O95222 327 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 SLC2A10O95528 541 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 STSP08842 583 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 TFPIP10646 304 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 SFTPCP11686 197 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 ZNF17P17021 662 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 PCMT1P22061 227 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 EMX1Q04741 257 aaPredicted RBP18.93■□□□□ 0.62
TPM1-208ENST00000404484 RPL18Q07020 188 aaKnown RBP18.93■□□□□ 0.62
TPM1-208ENST00000404484 TBCEQ15813 527 aaPredicted RBP18.93■□□□□ 0.62
TPM1-208ENST00000404484 ARMC4Q5T2S8 1044 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 C1QL3Q5VWW1 255 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 ZNF227Q86WZ6 799 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 LSRQ86X29 649 aaPredicted RBP18.93■□□□□ 0.62
TPM1-208ENST00000404484 CPOQ8IVL8 374 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 SCAIQ8N9R8 606 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 MOSPD2Q8NHP6 518 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 SLC25A36Q96CQ1 311 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 GNRHR2Q96P88 292 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 KATNB1Q9BVA0 655 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 TAPBPLQ9BX59 468 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 BOKQ9UMX3 212 aaPredicted RBP18.93■□□□□ 0.62
TPM1-208ENST00000404484 G3V3Y1 287 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 WISP1O95388 367 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 FADS2O95864 444 aaKnown RBP18.93■□□□□ 0.62
TPM1-208ENST00000404484 GRPRP30550 384 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 HTR1FP30939 366 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 SRD5A2P31213 254 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 MTNR1AP48039 350 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 DNASE1L1P49184 302 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 CCL11P51671 97 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 RAB40BQ12829 278 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 ITGADQ13349 1161 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 PMS2P3Q13401 168 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 EMC4Q5J8M3 183 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 GPR139Q6DWJ6 353 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 PLBD1Q6P4A8 553 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 BCDIN3DQ7Z5W3 292 aaKnown RBP18.93■□□□□ 0.62
TPM1-208ENST00000404484 IGFN1Q86VF2 1251 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 LRRC75AQ8NAA5 344 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 MUL1Q969V5 352 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 TMEM80Q96HE8 168 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 CDCA4Q9BXL8 241 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 SLC25A18Q9H1K4 315 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 ACOT13Q9NPJ3 140 aa18.93■□□□□ 0.62
TPM1-208ENST00000404484 FTCDNL1E5RQL4 147 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 ACVR2AP27037 513 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 CTXN1P60606 82 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 RAB39AQ14964 217 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 OR1C1Q15619 314 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 GXYLT1Q4G148 440 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 SLC6A19Q695T7 634 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 NIPAL3Q6P499 406 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 LINC00696Q6ZRV3 163 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 FAM98AQ8NCA5 519 aaKnown RBP18.92■□□□□ 0.62
TPM1-208ENST00000404484 OTULINQ96BN8 352 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 RNFT2Q96EX2 444 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 NPAS1Q99742 590 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 FAM173AQ9BQD7 235 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 RNF32Q9H0A6 362 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 ZNF71Q9NQZ8 489 aaPredicted RBP18.92■□□□□ 0.62
TPM1-208ENST00000404484 ALKBH4Q9NXW9 302 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 HDGFL3Q9Y3E1 203 aa18.92■□□□□ 0.62
TPM1-208ENST00000404484 FASNP49327 2511 aaKnown RBP18.91■□□□□ 0.62
TPM1-208ENST00000404484 EML6Q6ZMW3 1958 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 SLC22A31A6NKX4 558 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 ZNF99A8MXY4 864 aaPredicted RBP18.91■□□□□ 0.62
TPM1-208ENST00000404484 SHISA8B8ZZ34 492 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 K7EM74 188 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 FZD7O75084 574 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 NEURL1O76050 574 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 RAB36O95755 333 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 WDPCPO95876 746 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 TXNDC12O95881 172 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 C21orf33P30042 268 aaPredicted RBP18.91■□□□□ 0.62
TPM1-208ENST00000404484 SDHAP31040 664 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 ERVK-25P63136 954 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 RNLSQ5VYX0 342 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 ATP6V1C2Q8NEY4 427 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 OR52E2Q8NGJ4 325 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 FAR1Q8WVX9 515 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 PIGQQ9BRB3 760 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 KLHL1Q9NR64 748 aa18.91■□□□□ 0.62
TPM1-208ENST00000404484 WARS2Q9UGM6 360 aaKnown RBP18.91■□□□□ 0.62
TPM1-208ENST00000404484 MRPS18CQ9Y3D5 142 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms