RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 C1DQ13901 141 aaKnown RBP23.13■■□□□ 1.29
CPNE1-205ENST00000401607 ATCAYQ86WG3 371 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 GHDCQ8N2G8 530 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 ZNF485Q8NCK3 441 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 SGCZQ96LD1 299 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 PTGES2Q9H7Z7 377 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 ADGRL4Q9HBW9 690 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 WDR70Q9NW82 654 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 ERVK13-1Q9NX77 482 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 ANKRD33BA6NCL7 494 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 G3V3Y1 287 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 CCRL2O00421 344 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 TCEA1P23193 301 aaKnown RBP23.12■■□□□ 1.29
CPNE1-205ENST00000401607 MAP2K6P52564 334 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 VBP1P61758 197 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 MLLT11Q13015 90 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-205ENST00000401607 TMEM99Q8N816 258 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 ATP6V1C2Q8NEY4 427 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 ZNF417Q8TAU3 575 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 ZNRF4Q8WWF5 429 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 DDIT4LQ96D03 193 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 ZNF587Q96SQ5 575 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-205ENST00000401607 MRPL39Q9NYK5 338 aaKnown RBP23.12■■□□□ 1.29
CPNE1-205ENST00000401607 FAM47E-STBD1D6RA91 191 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 SLC22A1O15245 554 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 SERPINI2O75830 405 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 RBMS1P29558 406 aaKnown RBP23.12■■□□□ 1.29
CPNE1-205ENST00000401607 SH3BGRP55822 239 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-205ENST00000401607 MESTQ5EB52 335 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 EMC4Q5J8M3 183 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 LEG1Q6P5S2 330 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 BEST3Q8N1M1 668 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 OR5M1Q8NGP8 315 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 MFSD8Q8NHS3 518 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 ASPNQ9BXN1 380 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 ASB6Q9NWX5 421 aa23.12■■□□□ 1.29
CPNE1-205ENST00000401607 C12orf71A8MTZ7 269 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 C11orf98E9PRG8 122 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 PLPP3O14495 311 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 AIREO43918 545 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 MRPL3P09001 348 aaKnown RBP23.11■■□□□ 1.29
CPNE1-205ENST00000401607 SBK2P0C263 348 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 IMPDH2P12268 514 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 DCAF10Q5QP82 559 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 JMJD6Q6NYC1 403 aaPredicted RBP23.11■■□□□ 1.29
CPNE1-205ENST00000401607 ZNF227Q86WZ6 799 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 NDNFQ8TB73 568 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 TM9SF4Q92544 642 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 POTEKPQ9BYX7 375 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 OR51E2Q9H255 320 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 ASCL3Q9NQ33 180 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 GRHPRQ9UBQ7 328 aa23.11■■□□□ 1.29
CPNE1-205ENST00000401607 ZNF346Q9UL40 294 aaKnown RBP23.11■■□□□ 1.29
CPNE1-205ENST00000401607 H3BML4 177 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 LIFP15018 202 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 SPI1P17947 270 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 TGFBR1P36897 503 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 KRR1Q13601 381 aaKnown RBP23.1■■□□□ 1.29
CPNE1-205ENST00000401607 TGIF1Q15583 401 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 GPR139Q6DWJ6 353 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 JAZF1Q86VZ6 243 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 GALNT15Q8N3T1 639 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 ACBD7Q8N6N7 88 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 EXD3Q8N9H8 876 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 OR51L1Q8NGJ5 315 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 GATAD2BQ8WXI9 593 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 ZMYND19Q96E35 227 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-205ENST00000401607 TMEM41AQ96HV5 264 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 INIPQ9NRY2 104 aa23.1■■□□□ 1.29
CPNE1-205ENST00000401607 AHCYL1O43865 530 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 CEACAM1P13688 526 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 GGTLC2Q14390 218 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 OR7A5Q15622 319 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 ZBTB8AQ96BR9 441 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 GNRHR2Q96P88 292 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 SERINC1Q9NRX5 453 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 CORINQ9Y5Q5 1042 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 AHCTF1Q8WYP5 2266 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 A0A087WZY1 265 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 RNF13O43567 381 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 BCL10O95999 233 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 TFPIP10646 304 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 ADH6P28332 368 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 IDUAP35475 653 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 EIF1P41567 113 aaKnown RBP23.09■■□□□ 1.29
CPNE1-205ENST00000401607 SLC25A1P53007 311 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 TIGD3Q6B0B8 471 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 C3orf33Q6P1S2 294 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 KLHL36Q8N4N3 616 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 OR1J4Q8NGS1 313 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 OR52N1Q8NH53 320 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 IP6K3Q96PC2 410 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 TIMP4Q99727 224 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 ARHGAP9Q9BRR9 750 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 ISYNA1Q9NPH2 558 aa23.09■■□□□ 1.29
CPNE1-205ENST00000401607 PTPRBP23467 1997 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 A0A0G2JMM0 328 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 A0A1W2PPB8 328 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 A0A1W2PRS3 328 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 LIPT2A6NK58 231 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms