RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 OR7A10O76100 309 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 TSPAN19P0C672 248 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 KLK2P20151 261 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 OR3A2P47893 321 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 PRKCDQ05655 676 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 GABPB1Q06547 395 aaPredicted RBP15.69■□□□□ 0.1
CTNS-203ENST00000399306 PUDPQ08623 228 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 TFAP2EQ6VUC0 442 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 RRM2BQ7LG56 351 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 SLC46A3Q7Z3Q1 461 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 PXKQ7Z7A4 578 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 P3H2Q8IVL5 708 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 ADGRG5Q8IZF4 528 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 CDK20Q8IZL9 346 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 LINC00471Q8N535 108 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 SLC7A13Q8TCU3 470 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 DNAJA3Q96EY1 480 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 SEPHS2Q99611 448 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 SPOCK3Q9BQ16 436 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 FUZQ9BT04 418 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 ENKD1Q9H0I2 346 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 OR10A4Q9H209 315 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 YY1AP1Q9H869 796 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 KRCC1Q9NPI7 259 aaPredicted RBP15.69■□□□□ 0.1
CTNS-203ENST00000399306 PLEKHB1Q9UF11 243 aaPredicted RBP15.69■□□□□ 0.1
CTNS-203ENST00000399306 RCE1Q9Y256 329 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 NOSIPQ9Y314 301 aaKnown RBP15.69■□□□□ 0.1
CTNS-203ENST00000399306 NOX1Q9Y5S8 564 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 V9GYQ6 96 aa15.69■□□□□ 0.1
CTNS-203ENST00000399306 NKX2-6A6NCS4 301 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 PRSS44E7EML9 344 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 PLPP3O14495 311 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 AKAP8O43823 692 aaKnown RBP15.68■□□□□ 0.1
CTNS-203ENST00000399306 GADD45GO95257 159 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 CH25HO95992 272 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 HIST1H2ABP04908 130 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 ZNF43P17038 809 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 SLC9A3P48764 834 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 PMS2P3Q13401 168 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 ZNF730Q6ZMV8 503 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 TMPRSS11FQ6ZWK6 438 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 CREB3L2Q70SY1 520 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 HIST3H2AQ7L7L0 130 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 NUFIP2Q7Z417 695 aaKnown RBP15.68■□□□□ 0.1
CTNS-203ENST00000399306 C10orf53Q8N6V4 93 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 PAPD5Q8NDF8 572 aaKnown RBP15.68■□□□□ 0.1
CTNS-203ENST00000399306 HIST1H2ACQ93077 130 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 BPIFA2Q96DR5 249 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 USB1Q9BQ65 265 aaKnown RBP15.68■□□□□ 0.1
CTNS-203ENST00000399306 RBM24Q9BX46 236 aaKnown RBP15.68■□□□□ 0.1
CTNS-203ENST00000399306 B3GAT1Q9P2W7 334 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 RHCGQ9UBD6 479 aa15.68■□□□□ 0.1
CTNS-203ENST00000399306 NPIPB13A6NJU9 1138 aa15.67■□□□□ 0.1
CTNS-203ENST00000399306 NPIPB4C9JG80 1138 aa15.67■□□□□ 0.1
CTNS-203ENST00000399306 MS4A18H0YCH9 400 aa15.67■□□□□ 0.1
CTNS-203ENST00000399306 MRPL33O75394 65 aaKnown RBP15.67■□□□□ 0.1
CTNS-203ENST00000399306 SMNDC1O75940 238 aaKnown RBP eCLIP15.67■□□□□ 0.1
CTNS-203ENST00000399306 NQO1P15559 274 aaKnown RBP15.67■□□□□ 0.1
CTNS-203ENST00000399306 FUT1P19526 365 aa15.67■□□□□ 0.1
CTNS-203ENST00000399306 P2RY6Q15077 328 aa15.67■□□□□ 0.1
CTNS-203ENST00000399306 MS4A18Q3C1V0 323 aa15.67■□□□□ 0.1
CTNS-203ENST00000399306 PODNL1Q6PEZ8 512 aa15.67■□□□□ 0.1
CTNS-203ENST00000399306 ZNF474Q6S9Z5 364 aaPredicted RBP15.67■□□□□ 0.1
CTNS-203ENST00000399306 ZIC4Q8N9L1 334 aa15.67■□□□□ 0.1
CTNS-203ENST00000399306 ZNF610Q8N9Z0 462 aa15.67■□□□□ 0.1
CTNS-203ENST00000399306 PFN4Q8NHR9 129 aa15.67■□□□□ 0.1
CTNS-203ENST00000399306 NPDC1Q9NQX5 325 aaPredicted RBP15.67■□□□□ 0.1
CTNS-203ENST00000399306 KPNA4O00629 521 aaPredicted RBP15.66■□□□□ 0.1
CTNS-203ENST00000399306 CIB2O75838 187 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 OR6A2O95222 327 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 IFI30P13284 250 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 RRM2P31350 389 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 IFNGR2P38484 337 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 CD79BP40259 229 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 LIMS1P48059 325 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 SPIBQ01892 262 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 FGD3Q5JSP0 725 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 C1QTNF12Q5T7M4 302 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 NHLRC1Q6VVB1 395 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 Q6ZT83 130 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 NANOGNBQ7Z5D8 188 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 LUZP2Q86TE4 346 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 GPAT4Q86UL3 456 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 SPATA24Q86W54 205 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 EPHX4Q8IUS5 362 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 NRMQ8IXM6 262 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 POMGNT2Q8NAT1 580 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 ANKK1Q8NFD2 765 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 CANT1Q8WVQ1 401 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 APH1AQ96BI3 265 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 DUS3LQ96G46 650 aaKnown RBP15.66■□□□□ 0.1
CTNS-203ENST00000399306 HDHD5Q9BXW7 423 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 OPN3Q9H1Y3 402 aaPredicted RBP15.66■□□□□ 0.1
CTNS-203ENST00000399306 C20orf141Q9NUB4 165 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 CCM2LQ9NUG4 571 aaPredicted RBP15.66■□□□□ 0.1
CTNS-203ENST00000399306 GALNT8Q9NY28 637 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 MALT1Q9UDY8 824 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 HIF3AQ9Y2N7 669 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 PKDREJQ9NTG1 2253 aa15.66■□□□□ 0.1
CTNS-203ENST00000399306 ALPK2Q86TB3 2170 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms