RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 C12orf40Q86WS4 652 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 TGM7Q96PF1 710 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 ZFYVE21Q9BQ24 234 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 ISYNA1Q9NPH2 558 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 TAAR2Q9P1P5 351 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 SLC23A2Q9UGH3 650 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 GABARAPH6UMI1 98 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 CCSO14618 274 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 FGF9P31371 208 aaPredicted RBP13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 EIF2B1Q14232 305 aaKnown RBP13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 DGLUCYQ7Z3D6 616 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 CDH26Q8IXH8 852 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 OR51S1Q8NGJ8 323 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 OR52B4Q8NGK2 314 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 GPR148Q8TDV2 347 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 ISG20L2Q9H9L3 353 aaKnown RBP13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 ELF5Q9UKW6 265 aaPredicted RBP13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 ATG4BQ9Y4P1 393 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 EGFP01133 1207 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 CD22P20273 847 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 SNTB1Q13884 538 aaKnown RBP13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 RPL22L1Q6P5R6 122 aaKnown RBP13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 OR14K1Q8NGZ2 314 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 ZNF417Q8TAU3 575 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 NEK7Q8TDX7 302 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 SMIM3Q9BZL3 60 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 SLC52A3Q9NQ40 469 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 SMCO4Q9NRQ5 59 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 SIDT1Q9NXL6 827 aaKnown RBP13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 SPHK1Q9NYA1 384 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 KCMF1Q9P0J7 381 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 RBM7Q9Y580 266 aaKnown RBP13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 CPED1A4D0V7 1026 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 TSTD3H0UI37 97 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 RDH16O75452 317 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 TEAD1P28347 426 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 HHEXQ03014 270 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 RPE65Q16518 533 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 USP53Q70EK8 1073 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 NDUFAF7Q7L592 441 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 SLC29A4Q7RTT9 530 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 PXKQ7Z7A4 578 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 NKAIN4Q8IVV8 208 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 KLHDC8BQ8IXV7 354 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 OR11H7Q8NGC8 314 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 TMEM255BQ8WV15 326 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 LURAP1Q96LR2 239 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 MS4A4EQ96PG1 132 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 KLK11Q9UBX7 282 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 EPHA6Q9UF33 1036 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 APOBEC3BQ9UH17 382 aaKnown RBP13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 TMEM14AQ9Y6G1 99 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 PXNP49023 591 aaPredicted RBP13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 MVDP53602 400 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 VAMP2P63027 116 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 NKX6-1P78426 367 aaPredicted RBP13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 ZNF765Q7L2R6 523 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 RNF141Q8WVD5 230 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 PBDC1Q9BVG4 233 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 GFOD1Q9NXC2 390 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 CYB5R1Q9UHQ9 305 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 MAGEB4O15481 346 aaPredicted RBP13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 APEHP13798 732 aaKnown RBP13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 NME2P22392 152 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 HNRNPA2B1P22626 353 aaKnown RBP13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 TAS2R19P59542 299 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 CSNK1G2P78368 415 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 LNX2Q8N448 690 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 OR2T4Q8NH00 348 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 SLC25A44Q96H78 314 aaPredicted RBP13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 ABHD1Q96SE0 405 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 FGF20Q9NP95 211 aaPredicted RBP13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 A4GALTQ9NPC4 353 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 ACSS1Q9NUB1 689 aaPredicted RBP13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 PLXNB2O15031 1838 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 A0A1B0GUH1 482 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 PPM1DO15297 605 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 GPRIN2O60269 458 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 ATP5A1P25705 553 aaKnown RBP13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 TCTN1Q2MV58 587 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 HCAR1Q9BXC0 346 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 SLC25A32Q9H2D1 315 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 APMAPQ9HDC9 416 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 SEMA4GQ9NTN9 838 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 ZNF281Q9Y2X9 895 aa13.49□□□□□ -0.25
RPRD1A-202ENST00000399022 HCRTR2O43614 444 aa13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 SEMA4FO95754 770 aa13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 OR8G3PP0DMU2 310 aa13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 RNH1P13489 461 aaKnown RBP13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 PLEKHN1Q494U1 663 aaPredicted RBP13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 KCTD18Q6PI47 426 aaPredicted RBP13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 Q6ZSR6 202 aa13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 TECPR1Q7Z6L1 1165 aa13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 KIAA0907Q7Z7F0 614 aaPredicted RBP13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 CMTM4Q8IZR5 234 aa13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 OR5M1Q8NGP8 315 aa13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 SEMA4CQ9C0C4 833 aa13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 A0A0A6YYC8 382 aaPredicted RBP13.48□□□□□ -0.25
RPRD1A-202ENST00000399022 PRSS38A1L453 326 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms