RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 A0A1B0GTH9 108 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 FZD7O75084 574 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 OR7A10O76100 309 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 SEMA4FO95754 770 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 OPN1LWP04000 364 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 HLA-DMAP28067 261 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 FRKP42685 505 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-202ENST00000398417 LSSP48449 732 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 GPR143P51810 404 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 AKR1D1P51857 326 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ARG2P78540 354 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 KCNAB1Q14722 419 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 HEPHL1Q6MZM0 1159 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 TMPRSS12Q86WS5 348 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 CHST4Q8NCG5 386 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 C17orf47Q8NEP4 570 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 NT5CQ8TCD5 201 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 LGALS14Q8TCE9 139 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 BRIX1Q8TDN6 353 aaKnown RBP4.54□□□□□ -1.68
SMAD4-202ENST00000398417 KLHDC7BQ96G42 594 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 JSRP1Q96MG2 331 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-202ENST00000398417 OR2A5Q96R48 311 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 DPYSL5Q9BPU6 564 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 NOX4Q9NPH5 578 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF346Q9UL40 294 aaKnown RBP4.54□□□□□ -1.68
SMAD4-202ENST00000398417 SPEF1Q9Y4P9 236 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 HEATR5BQ9P2D3 2071 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 HTTP42858 3142 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 SLC25A12O75746 678 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 APBB3O95704 486 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ALDOBP05062 364 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 TRAPPC2P0DI81 140 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 TRAPPC2BP0DI82 140 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 HTR2AP28223 471 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ADPRHP54922 357 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 CLDN20P56880 219 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF550Q7Z398 422 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 OR2L13Q8N349 312 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 SYNPRQ8TBG9 265 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF681Q96N22 645 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 CD207Q9UJ71 328 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 CES1P1Q9UKY3 287 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 SLC22A7Q9Y694 548 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 I3L521 148 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 UCHL1P09936 223 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 TSPAN5P62079 268 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 SLC25A25Q6KCM7 469 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 WDR88Q6ZMY6 472 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF527Q8NB42 609 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 FAM174AQ8TBP5 190 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 CFHR5Q9BXR6 569 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ADAM19Q9H013 955 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 COMMD4Q9H0A8 199 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 CMC2Q9NRP2 79 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 DZANK1Q9NVP4 752 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 OBP2AQ9NY56 170 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 OR6C2Q9NZP2 312 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 CPNE7Q9UBL6 633 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 SLC17A4Q9Y2C5 497 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 AHCTF1Q8WYP5 2266 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ABCA7Q8IZY2 2146 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ASPMQ8IZT6 3477 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 TRAV18A0A075B6X5 111 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 LOC100509620A0A075B734 347 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 SERINC4A6NH21 518 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF780AO75290 641 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-202ENST00000398417 OR1D4P47884 311 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 KIAA1024LP59773 190 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 RAB5BP61020 215 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 FGL1Q08830 312 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 SHHQ15465 462 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 CCDC58Q4VC31 144 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 CMTM4Q8IZR5 234 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 OR10H5Q8NGA6 315 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 OR6F1Q8NGZ6 308 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 OR5AK2Q8NH90 309 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 GIMAP5Q96F15 307 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 NRSN2Q9GZP1 204 aa4.54□□□□□ -1.68
SMAD4-202ENST00000398417 RBM7Q9Y580 266 aaKnown RBP4.54□□□□□ -1.68
SMAD4-202ENST00000398417 PLRG1O43660 514 aaKnown RBP4.53□□□□□ -1.68
SMAD4-202ENST00000398417 FMO6PO60774 539 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 RFPL3O75679 317 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 CTSBP07858 339 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 IL12BP29460 328 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 RAD52P43351 418 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ACTC1P68032 377 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 ACTA1P68133 377 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 SIRPAP78324 504 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 KIRREL2Q6UWL6 708 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 CD300LDQ6UXZ3 194 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 LRRC69Q6ZNQ3 347 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 CORO2AQ92828 525 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 HYLS1Q96M11 299 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 TSSK2Q96PF2 358 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 LMF1Q96S06 567 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 PRSS27Q9BQR3 290 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 PBX4Q9BYU1 374 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 NOX3Q9HBY0 568 aa4.53□□□□□ -1.68
SMAD4-202ENST00000398417 COPS3Q9UNS2 423 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms