RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 EEF1E1O43324 174 aaKnown RBP16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZNF749O43361 778 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GMFGO60234 142 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 HOXD4P09016 255 aaPredicted RBP16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 NPR2P20594 1047 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CD1CP29017 333 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PITPNBP48739 271 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PSMD4P55036 377 aaKnown RBP16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CLDN20P56880 219 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SIRPAP78324 504 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 BTN1A1Q13410 526 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CDK5R1Q15078 307 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 RNASE12Q5GAN4 147 aaKnown RBP16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 DPY19L2P2Q6ZN68 376 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SMIM19Q96E16 107 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 HSPA12BQ96MM6 686 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 OR14A2Q96R54 314 aa16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 USB1Q9BQ65 265 aaKnown RBP16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PNO1Q9NRX1 252 aaKnown RBP16.76■□□□□ 0.27
CHRFAM7A-202ENST00000397827 A0A1B0GVT2 93 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 FZD7O75084 574 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SNRPBP14678 240 aaKnown RBP16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SPI1P17947 270 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 HLA-DMAP28067 261 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SRP9P49458 86 aaKnown RBP16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 HSD17B7P56937 341 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GPR176Q14439 515 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 POU4F3Q15319 338 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ELOCQ15369 112 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 DEFB133Q30KQ1 61 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 KLHL26Q53HC5 615 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CMIPQ8IY22 773 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 C10orf53Q8N6V4 93 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PHOSPHO1Q8TCT1 267 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 RFT1Q96AA3 541 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZNF524Q96C55 264 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 KLHDC3Q9BQ90 382 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 IFT22Q9H7X7 185 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 NRIP3Q9NQ35 241 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PLCL2Q9UPR0 1127 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZNF337Q9Y3M9 751 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ASXL3Q9C0F0 2248 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 EML5Q05BV3 1969 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TRBV2A0A0J9YWF9 115 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SDC3O75056 442 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 HPGDP15428 266 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ATF1P18846 271 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GBX2P52951 348 aaPredicted RBP16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TIGD3Q6B0B8 471 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 APOOLQ6UXV4 268 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 COMMD7Q86VX2 200 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 POMGNT2Q8NAT1 580 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TSTD1Q8NFU3 115 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 Q96M85 177 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TSSK2Q96PF2 358 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 MARVELD1Q9BSK0 173 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PPA2Q9H2U2 334 aa16.75■□□□□ 0.27
CHRFAM7A-202ENST00000397827 IGHV1OR15-9A0A0B4J2B8 117 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 OGG1O15527 345 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 FOSL1P15407 271 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 RBMS1P29558 406 aaKnown RBP16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 AQP2P41181 271 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 OR1D4P47884 311 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 DIO1P49895 249 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 RPS11P62280 158 aaKnown RBP eCLIP16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GAS6Q14393 721 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TMEM81Q6P7N7 255 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ESPNLQ6ZVH7 1005 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 KRT74Q7RTS7 529 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 SLC43A2Q8N370 569 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 OR14A16Q8NHC5 309 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ST8SIA2Q92186 375 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 DNAJA3Q96EY1 480 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 MOGAT1Q96PD6 335 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 DDOQ99489 341 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GTPBP2Q9BX10 602 aaKnown RBP16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 MRPS7Q9Y2R9 242 aaKnown RBP16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 AK6Q9Y3D8 172 aaKnown RBP16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ABCA7Q8IZY2 2146 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TEX13CA0A0J9YWL9 993 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ELOA3DA6NLF2 546 aaPredicted RBP16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 EDNRAP25101 427 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ACTA2P62736 377 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ACTG2P63267 376 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GGTLC2Q14390 218 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ELOA3BQ3SY89 546 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PRAMEF17Q5VTA0 474 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ELOA3Q8NG57 546 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PTPMT1Q8WUK0 201 aaPredicted RBP16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ABCG5Q9H222 651 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 ING3Q9NXR8 418 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 NCDNQ9UBB6 729 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 GMEB2Q9UKD1 530 aa16.74■□□□□ 0.27
CHRFAM7A-202ENST00000397827 PPM1BO75688 479 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 MAGEB1P43366 347 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 AANATQ16613 207 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 LEG1Q6P5S2 330 aa16.73■□□□□ 0.27
CHRFAM7A-202ENST00000397827 TTLL10Q6ZVT0 673 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms