RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 DOK1Q99704 481 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 TAPBPLQ9BX59 468 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 BPESC1Q9GZL8 116 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 SLC38A1Q9H2H9 487 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 SLC17A7Q9P2U7 560 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 PCDHB14Q9Y5E9 798 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 A0A0A6YYJ9 748 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 CCDC154A6NI56 674 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 A8MVM7 634 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 SLCO1B7G3V0H7 640 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 AKR7A3O95154 331 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 LGI1O95970 557 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 IGLV1-44P01699 117 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 DBIP07108 87 aaKnown RBP7.59□□□□□ -1.19
CAPN3-208ENST00000397204 BPGMP07738 259 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 MYZAPP0CAP1 466 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 CBR1P16152 277 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 NPR2P20594 1047 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 S100A3P33764 101 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 CLNS1AP54105 237 aaKnown RBP7.59□□□□□ -1.19
CAPN3-208ENST00000397204 SH3BGRP55822 239 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-208ENST00000397204 COPZ1P61923 177 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 RUNX1T1Q06455 604 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 OR7A5Q15622 319 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 SYPL1Q16563 259 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 FDX2Q6P4F2 183 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 HMGN2P46Q86SG4 172 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 GPAT4Q86UL3 456 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 ANKRD46Q86W74 232 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 NUDCD3Q8IVD9 361 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 CCDC36Q8IYA8 594 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 GSPT2Q8IYD1 628 aaKnown RBP7.59□□□□□ -1.19
CAPN3-208ENST00000397204 LRRC34Q8IZ02 419 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 ZNF786Q8N393 782 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 TRIML2Q8N7C3 387 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 ANKFN1Q8N957 763 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 CCDC115Q96NT0 180 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 SLC35A5Q9BS91 424 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 SOX7Q9BT81 388 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 LINC00470Q9BZP3 86 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 ROPN1BQ9BZX4 212 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-208ENST00000397204 ZNF442Q9H7R0 627 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 ROPN1Q9HAT0 212 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-208ENST00000397204 BTNL2Q9UIR0 455 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 RASD1Q9Y272 281 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-208ENST00000397204 PKD1L1Q8TDX9 2849 aa7.59□□□□□ -1.19
CAPN3-208ENST00000397204 MEGF8Q7Z7M0 2845 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 A0A096LPI6 279 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 SCO2A0A1W2PP80 73 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 TMEM129A0AVI4 362 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 LRP5LA4QPB2 252 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 RPL36A-HNRNPH2H7BZ11 118 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 NR5A2O00482 541 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 SPAG7O75391 227 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 IGKV3-15P01624 115 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 TFPTP0C1Z6 253 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 CECR9P0C854 216 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 NR2F1P10589 423 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 FSTP19883 344 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 RPS4Y1P22090 263 aaKnown RBP7.58□□□□□ -1.2
CAPN3-208ENST00000397204 APEX1P27695 318 aaKnown RBP7.58□□□□□ -1.2
CAPN3-208ENST00000397204 THBS4P35443 961 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 SELENOPP49908 381 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 P2RY4P51582 365 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 DVL1P1P54792 670 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-208ENST00000397204 HGFACQ04756 655 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 LRRC74AQ0VAA2 488 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 RIN1Q13671 783 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 MRPL2Q5T653 305 aaKnown RBP7.58□□□□□ -1.2
CAPN3-208ENST00000397204 WBP2NLQ6ICG8 309 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 VHLLQ6RSH7 139 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 MEX3DQ86XN8 651 aaKnown RBP7.58□□□□□ -1.2
CAPN3-208ENST00000397204 RNF130Q86XS8 419 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 EPHX4Q8IUS5 362 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 PEX5LQ8IYB4 626 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 KIRREL3Q8IZU9 778 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 ZFAND2BQ8WV99 257 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 WDR60Q8WVS4 1066 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 ADPRHL2Q9NX46 363 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 LGALS13Q9UHV8 139 aa7.58□□□□□ -1.2
CAPN3-208ENST00000397204 MEGF11A6BM72 1044 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 CDHR4A6H8M9 788 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 B4DSR2 109 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 hCG_2039718K7EN88 272 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 NPIPB7O75200 414 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 UPK3AO75631 287 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 CHRM4P08173 479 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 IFNGR1P15260 489 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 ITGA2P17301 1181 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 LBPP18428 481 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 CALCRP30988 508 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 ARR3P36575 388 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 ACAA2P42765 397 aaKnown RBP7.57□□□□□ -1.2
CAPN3-208ENST00000397204 EVX1P49640 407 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 CDH15P55291 814 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 ARF1P84077 181 aaKnown RBP7.57□□□□□ -1.2
CAPN3-208ENST00000397204 POU3F1Q03052 451 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-208ENST00000397204 SCGB2A2Q13296 93 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 ADRM1Q16186 407 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms