RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 C1orf146Q5VVC0 180 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 ANKRD34AQ69YU3 496 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 THSD4Q6ZMP0 1018 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 RASSF6Q6ZTQ3 369 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 OR5M9Q8NGP3 310 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 PIGXQ8TBF5 258 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 ASB10Q8WXI3 467 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 OXGR1Q96P68 337 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 KCNK17Q96T54 332 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 NIPSNAP1Q9BPW8 284 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 NMNAT2Q9BZQ4 307 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 SLC5A6Q9Y289 635 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 USP9XQ93008 2570 aaPredicted RBP9.39□□□□□ -0.91
NUP98-205ENST00000397007 SLC22A20A6NK97 555 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 H0Y3Z8 333 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 M0R082 166 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 SEC14L5O43304 696 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 GADD45GO95257 159 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 PGA4P0DJD7 388 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 PGA3P0DJD8 388 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 YAP1P46937 504 aaKnown RBP9.39□□□□□ -0.91
NUP98-205ENST00000397007 IST1P53990 364 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 CHRNB3Q05901 458 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 C1QTNF12Q5T7M4 302 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 EEF1A1P5Q5VTE0 462 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 KLHL17Q6TDP4 642 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 B3GNT6Q6ZMB0 384 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 ZNF417Q8TAU3 575 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 OR5B2Q96R09 309 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 OR2M2Q96R28 347 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 ZNF587Q96SQ5 575 aaPredicted RBP9.39□□□□□ -0.91
NUP98-205ENST00000397007 UGT2A1Q9Y4X1 527 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 FREM1Q5H8C1 2179 aa9.39□□□□□ -0.91
NUP98-205ENST00000397007 FAM47E-STBD1D6RA91 191 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 ALPLP05186 524 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 CTSSP25774 331 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 CCR4P51679 360 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 SMIM11AP58511 58 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 TAF11Q15544 211 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 PHYHD1Q5SRE7 291 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 ZNF474Q6S9Z5 364 aaPredicted RBP9.38□□□□□ -0.91
NUP98-205ENST00000397007 FAM214BQ7L5A3 538 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 NUFIP2Q7Z417 695 aaKnown RBP9.38□□□□□ -0.91
NUP98-205ENST00000397007 P3H2Q8IVL5 708 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 C20orf196Q8IYI0 205 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 LILRB4Q8NHJ6 448 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 LRTOMTQ8WZ04 291 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 PIGMQ9H3S5 423 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 LDAHQ9H6V9 325 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 SLC25A19Q9HC21 320 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 VSX1Q9NZR4 365 aaPredicted RBP9.38□□□□□ -0.91
NUP98-205ENST00000397007 OSGIN2Q9Y236 505 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 TMEM5Q9Y2B1 443 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 TESMINQ9Y4I5 508 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 ARPC3O15145 178 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 RRP9O43818 475 aaKnown RBP9.38□□□□□ -0.91
NUP98-205ENST00000397007 TIPRLO75663 272 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 ADAP00813 363 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 RPL18Q07020 188 aaKnown RBP9.38□□□□□ -0.91
NUP98-205ENST00000397007 SF3B4Q15427 424 aaKnown RBP eCLIP9.38□□□□□ -0.911e-6■□□□□ 10.1
NUP98-205ENST00000397007 OGFRL1Q5TC84 451 aaPredicted RBP9.38□□□□□ -0.91
NUP98-205ENST00000397007 TMEM211Q6ICI0 200 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 OR2A2Q6IF42 318 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 ZNF808Q8N4W9 903 aaPredicted RBP9.38□□□□□ -0.91
NUP98-205ENST00000397007 OR9Q2Q8NGE9 314 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 FBLIM1Q8WUP2 373 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 DNAJC9Q8WXX5 260 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 CENPNQ96H22 339 aaPredicted RBP9.38□□□□□ -0.91
NUP98-205ENST00000397007 PSMG3-AS1Q96PY0 264 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 FNDC11Q9BVV2 318 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 PLA2G12AQ9BZM1 189 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 TMEM185BQ9H7F4 350 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 NPDC1Q9NQX5 325 aaPredicted RBP9.38□□□□□ -0.91
NUP98-205ENST00000397007 CAMK2AQ9UQM7 478 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 MED31Q9Y3C7 131 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 COL12A1Q99715 3063 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 MYO18BQ8IUG5 2567 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 CLDN1O95832 211 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 YES1P07947 543 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 SFTPDP35247 375 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 RBPJQ06330 500 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 C10orf128Q5T292 105 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 CCDC103Q8IW40 242 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 HS3ST5Q8IZT8 346 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 OR5K1Q8NHB7 308 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 MOSPD2Q8NHP6 518 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 ROBO4Q8WZ75 1007 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 SGTBQ96EQ0 304 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 ZNF385AQ96PM9 386 aaKnown RBP9.38□□□□□ -0.91
NUP98-205ENST00000397007 TSPAN32Q96QS1 320 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 ZNF224Q9NZL3 707 aa9.38□□□□□ -0.91
NUP98-205ENST00000397007 MAGED1Q9Y5V3 778 aaPredicted RBP9.38□□□□□ -0.91
NUP98-205ENST00000397007 HSPB2A8KAH6 182 aa9.37□□□□□ -0.91
NUP98-205ENST00000397007 A8MXE2 369 aa9.37□□□□□ -0.91
NUP98-205ENST00000397007 SULT2B1O00204 365 aa9.37□□□□□ -0.91
NUP98-205ENST00000397007 PRRG2O14669 202 aa9.37□□□□□ -0.91
NUP98-205ENST00000397007 LRRTM2O43300 516 aa9.37□□□□□ -0.91
NUP98-205ENST00000397007 AKR7A3O95154 331 aa9.37□□□□□ -0.91
NUP98-205ENST00000397007 RPS3AP61247 264 aaKnown RBP9.37□□□□□ -0.91
NUP98-205ENST00000397007 HSPB2Q16082 182 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms