RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ZNF136P52737 540 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 TAS2R20P59543 309 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 SLC7A9P82251 487 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 IKZF1Q13422 519 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 TSSK4Q6SA08 328 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 TCEAL8Q8IYN2 117 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 ZNF511Q8NB15 262 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 OR4C16Q8NGL9 310 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 ARRDC3Q96B67 414 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 TSSK2Q96PF2 358 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 GFI1Q99684 422 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 PTDSS2Q9BVG9 487 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 ZMAT3Q9HA38 289 aaKnown RBP9.03□□□□□ -0.96
TRIM39-203ENST00000396547 EXOSC3Q9NQT5 275 aaKnown RBP9.03□□□□□ -0.96
TRIM39-203ENST00000396547 PRDM7Q9NQW5 492 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 ACTR10Q9NZ32 417 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 MAFFQ9ULX9 164 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 FOXJ3Q9UPW0 622 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 SIGLEC7Q9Y286 467 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 GON4LQ3T8J9 2241 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 ZNF106Q9H2Y7 1883 aaKnown RBP9.03□□□□□ -0.96
TRIM39-203ENST00000396547 TRAV18A0A075B6X5 111 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 TRAV1-2A0A0B4J238 106 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 LILRB3O75022 631 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 SC5DO75845 299 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 OR8G3PP0DMU2 310 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 APEHP13798 732 aaKnown RBP9.03□□□□□ -0.96
TRIM39-203ENST00000396547 RPS11P62280 158 aaKnown RBP eCLIP9.03□□□□□ -0.96
TRIM39-203ENST00000396547 MAT1AQ00266 395 aaKnown RBP9.03□□□□□ -0.96
TRIM39-203ENST00000396547 TNFRSF17Q02223 184 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 PON3Q15166 354 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 SLC48A1Q6P1K1 146 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 ABHD17CQ6PCB6 329 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 RNF44Q7L0R7 432 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 ASPGQ86U10 573 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 SPICQ8N5J4 248 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 OR5K2Q8NHB8 316 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 SPPL3Q8TCT6 385 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 MRGPRX3Q96LB0 322 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 ZNF558Q96NG5 402 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 MEPEQ9NQ76 525 aaPredicted RBP9.03□□□□□ -0.96
TRIM39-203ENST00000396547 C2orf42Q9NWW7 574 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 IKZF2Q9UKS7 526 aa9.03□□□□□ -0.96
TRIM39-203ENST00000396547 ANKRD20A5PA0PJZ0 165 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 TUBAL3A6NHL2 446 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 NDUFA2O43678 99 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 TBX19O60806 448 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 PRAMEF2O60811 474 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 NDUFB6O95139 128 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 IFNGP01579 166 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 MYOGP15173 224 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 UBE2IP63279 158 aaKnown RBP9.02□□□□□ -0.96
TRIM39-203ENST00000396547 PRDX1Q06830 199 aaKnown RBP9.02□□□□□ -0.96
TRIM39-203ENST00000396547 EXOSC7Q15024 291 aaKnown RBP9.02□□□□□ -0.96
TRIM39-203ENST00000396547 AMZ1Q400G9 498 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 DEFB134Q4QY38 66 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 SFTPA1Q8IWL2 248 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 C10orf53Q8N6V4 93 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 PNPLA2Q96AD5 504 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 INSM2Q96T92 566 aaPredicted RBP9.02□□□□□ -0.96
TRIM39-203ENST00000396547 CNN2Q99439 309 aaKnown RBP9.02□□□□□ -0.96
TRIM39-203ENST00000396547 SLC6A17Q9H1V8 727 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 TMEM231Q9H6L2 316 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 SCPEP1Q9HB40 452 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 FANCFQ9NPI8 374 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 ASF1BQ9NVP2 202 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 NCDNQ9UBB6 729 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 APOBEC3BQ9UH17 382 aaKnown RBP9.02□□□□□ -0.96
TRIM39-203ENST00000396547 FBXO4Q9UKT5 387 aa9.02□□□□□ -0.96
TRIM39-203ENST00000396547 FARSAQ9Y285 508 aaKnown RBP9.02□□□□□ -0.96
TRIM39-203ENST00000396547 NAP1L6A6NFF2 107 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 ACOT7O00154 380 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 LDB3O75112 727 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 CLEC3AO75596 197 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 ZFPL1O95159 310 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 RPN2P04844 631 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 ANXA2P07355 339 aaKnown RBP9.02□□□□□ -0.97
TRIM39-203ENST00000396547 MST1P26927 711 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 DPP4P27487 766 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 WASP42768 502 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 NANOS3P60323 173 aaKnown RBP9.02□□□□□ -0.97
TRIM39-203ENST00000396547 ZNF658BQ4V348 819 aaPredicted RBP9.02□□□□□ -0.97
TRIM39-203ENST00000396547 PRRT3Q5FWE3 981 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 TCEAL5Q5H9L2 206 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 PWWP2BQ6NUJ5 590 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 MFSD12Q6NUT3 480 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 UNQ6126/PRO20091Q6UXV3 157 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 COX18Q8N8Q8 333 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 CPNE2Q96FN4 548 aaPredicted RBP9.02□□□□□ -0.97
TRIM39-203ENST00000396547 SDF2Q99470 211 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 TMEM27Q9HBJ8 222 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 ANKRD10Q9NXR5 420 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 SPHK1Q9NYA1 384 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 PLEKHA6Q9Y2H5 1048 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 M0QYG6 137 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 OR2A4O95047 310 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 HPP00738 406 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 CBX5P45973 191 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 B2MP61769 119 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 SERTAD2Q14140 314 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms