RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 FAM25AB3EWG3 89 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 FAM25CB3EWG5 89 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 FAM25GB3EWG6 89 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 EDNRAP25101 427 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 TGM4P49221 684 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 INPP1P49441 399 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 EFNA3P52797 238 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 SUMO3P55854 103 aaPredicted RBP14.67□□□□□ -0.06
SNX6-202ENST00000396526 MRPL28Q13084 256 aaKnown RBP14.67□□□□□ -0.06
SNX6-202ENST00000396526 ACSM3Q53FZ2 586 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 SLC38A9Q8NBW4 561 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 SLC22A8Q8TCC7 542 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 GTPBP2Q9BX10 602 aaKnown RBP14.67□□□□□ -0.06
SNX6-202ENST00000396526 SRA1Q9HD15 236 aaKnown RBP14.67□□□□□ -0.06
SNX6-202ENST00000396526 C14orf119Q9NWQ9 140 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 U3KQA8 63 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 EML5Q05BV3 1969 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 TRBV2A0A0J9YWF9 115 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 GPRIN2O60269 458 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 ONECUT2O95948 504 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 AHCYP23526 432 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 AZGP1P25311 298 aaKnown RBP14.67□□□□□ -0.06
SNX6-202ENST00000396526 PTBP1P26599 531 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNX6-202ENST00000396526 UQCRC1P31930 480 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 BLVRAP53004 296 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 CDONQ4KMG0 1287 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 SLC6A19Q695T7 634 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 DMKNQ6E0U4 476 aaPredicted RBP14.67□□□□□ -0.06
SNX6-202ENST00000396526 OR5J2Q8NH18 312 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 GPR119Q8TDV5 335 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 ST8SIA1Q92185 356 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 ADAD1Q96M93 576 aaKnown RBP14.67□□□□□ -0.06
SNX6-202ENST00000396526 INIPQ9NRY2 104 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 NCDNQ9UBB6 729 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 C9J4A7 227 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 CDKN2AP42771 156 aaKnown RBP14.67□□□□□ -0.06
SNX6-202ENST00000396526 CAV3P56539 151 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 IDNKQ5T6J7 187 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 SLC16A9Q7RTY1 509 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 C19orf18Q8NEA5 215 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 PHYHIPQ92561 330 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 ZC3H10Q96K80 434 aaKnown RBP14.67□□□□□ -0.06
SNX6-202ENST00000396526 TIGARQ9NQ88 270 aa14.67□□□□□ -0.06
SNX6-202ENST00000396526 SIRT4Q9Y6E7 314 aaPredicted RBP14.67□□□□□ -0.06
SNX6-202ENST00000396526 VSTM2BA6NLU5 285 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 GATBO75879 557 aaKnown RBP14.66□□□□□ -0.06
SNX6-202ENST00000396526 MST1P26927 711 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 CENPAP49450 140 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 GDI2P50395 445 aaKnown RBP14.66□□□□□ -0.06
SNX6-202ENST00000396526 SGCBQ16585 318 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 COL28A1Q2UY09 1125 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 APCDD1LQ8NCL9 501 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 DEFB126Q9BYW3 111 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 KLRF1Q9NZS2 232 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 PPIEQ9UNP9 301 aaKnown RBP14.66□□□□□ -0.06
SNX6-202ENST00000396526 FAM47E-STBD1D6RA91 191 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 OGG1O15527 345 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 ARHGEF9O43307 516 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 TIAF1O95411 115 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 TFP02787 698 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 FGF5P12034 268 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 TDGF1P13385 188 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 PRKCAP17252 672 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 TOMM34Q15785 309 aaPredicted RBP14.66□□□□□ -0.06
SNX6-202ENST00000396526 C1orf140Q5VVS0 124 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 TRIQKQ629K1 86 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 HBMQ6B0K9 141 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 NFAM1Q8NET5 270 aaPredicted RBP14.66□□□□□ -0.06
SNX6-202ENST00000396526 SMIM19Q96E16 107 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 DDOQ99489 341 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 SRRQ9GZT4 340 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 V9GYH0 126 aa14.66□□□□□ -0.06
SNX6-202ENST00000396526 E9PI62 339 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 MSX1P28360 303 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 E2F1Q01094 437 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 LTBQ06643 244 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 CDK5R1Q15078 307 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 PEAR1Q5VY43 1037 aaPredicted RBP14.65□□□□□ -0.06
SNX6-202ENST00000396526 CCBE1Q6UXH8 406 aaPredicted RBP14.65□□□□□ -0.06
SNX6-202ENST00000396526 FAM122BQ7Z309 247 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 SLC26A1Q9H2B4 701 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 ZMIZ1Q9ULJ6 1067 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 A0A1W2PRG6 482 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 ZNF879B4DU55 563 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 C11orf98E9PRG8 122 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 SNPHO15079 494 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 SELENOFO60613 162 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 KRT8P05787 483 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 CD1AP06126 327 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 VASNQ6EMK4 673 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 TEX19Q8NA77 164 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 LRRC75AQ8NAA5 344 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 SMAP2Q8WU79 429 aaPredicted RBP14.65□□□□□ -0.06
SNX6-202ENST00000396526 PELI1Q96FA3 418 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 TIMP4Q99727 224 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 TTTY10Q9BZA0 68 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 RTN4RQ9BZR6 473 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 MARCH7Q9H992 704 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 PCDHGB2Q9Y5G2 931 aa14.65□□□□□ -0.06
SNX6-202ENST00000396526 TRIOO75962 3097 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms