RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 MOSPD2Q8NHP6 518 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 LCORQ96JN0 433 aaPredicted RBP17.21■□□□□ 0.35
CBX1-202ENST00000393408 DHRS9Q9BPW9 319 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 G6PC3Q9BUM1 346 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 ALG12Q9BV10 488 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 OR10A4Q9H209 315 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 Q9N2J8 555 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 OR5V1Q9UGF6 321 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 A0A087WV48 116 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 FAM171A2A8MVW0 826 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 SULT1B1O43704 296 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 EGFP01133 1207 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 EPHA4P54764 986 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 PUDPQ08623 228 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 NNATQ16517 81 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 CLLU1Q5K131 121 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 METTL11BQ5VVY1 283 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 OR4C3Q8NH37 302 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 FCAMRQ8WWV6 532 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 RBM18Q96H35 190 aaKnown RBP17.21■□□□□ 0.35
CBX1-202ENST00000393408 NPDC1Q9NQX5 325 aaPredicted RBP17.21■□□□□ 0.35
CBX1-202ENST00000393408 KLK11Q9UBX7 282 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 TP53BP1Q12888 1972 aaPredicted RBP17.21■□□□□ 0.34
CBX1-202ENST00000393408 IGKV1D-42A0A075B6H8 117 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 C4orf47A7E2U8 309 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 CT45A8P0DMV1 189 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 CT45A9P0DMV2 189 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 LCN1P31025 176 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 CDKN2AP42771 156 aaKnown RBP17.2■□□□□ 0.34
CBX1-202ENST00000393408 BLVRAP53004 296 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 PRPS1P60891 318 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 TFF2Q03403 129 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 CT45A2Q5DJT8 189 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 TMEM31Q5JXX7 168 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 OLFML2AQ68BL7 652 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 LEG1Q6P5S2 330 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 APOOLQ6UXV4 268 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 SYNPRQ8TBG9 265 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 RBP7Q96R05 134 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 GPR174Q9BXC1 333 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 TSPAN10Q9H1Z9 355 aaPredicted RBP17.2■□□□□ 0.34
CBX1-202ENST00000393408 RXFP3Q9NSD7 469 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 KHDRBS3O75525 346 aaKnown RBP17.2■□□□□ 0.34
CBX1-202ENST00000393408 PDGFAP04085 211 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 RPL6Q02878 288 aaKnown RBP17.2■□□□□ 0.34
CBX1-202ENST00000393408 STX4Q12846 297 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 SLC6A19Q695T7 634 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 ZNF761Q86XN6 746 aaPredicted RBP17.2■□□□□ 0.34
CBX1-202ENST00000393408 ZNF511Q8NB15 262 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 GPBAR1Q8TDU6 330 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 SLC37A2Q8TED4 501 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 S100A16Q96FQ6 103 aaKnown RBP17.2■□□□□ 0.34
CBX1-202ENST00000393408 MRGPRX1Q96LB2 322 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 Q96M85 177 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 SLC19A3Q9BZV2 496 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 HCN3Q9P1Z3 774 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 UBQLN2Q9UHD9 624 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 UNC80Q8N2C7 3258 aa17.2■□□□□ 0.34
CBX1-202ENST00000393408 ANKRD20A5PA0PJZ0 165 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 ARPC1BO15143 372 aaKnown RBP17.19■□□□□ 0.34
CBX1-202ENST00000393408 SERPINI2O75830 405 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 TOXO94900 526 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 RAB40ALP0C0E4 278 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 CALCBP10092 127 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 ST6GAL1P15907 406 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 P2RX1P51575 399 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 YPEL5P62699 121 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 ZNF267Q14586 743 aaPredicted RBP17.19■□□□□ 0.34
CBX1-202ENST00000393408 Q6ZSR6 202 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 OR6V1Q8N148 313 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 FTMTQ8N4E7 242 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 BCORP1Q8N888 145 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 EXD3Q8N9H8 876 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 RAB40AQ8WXH6 277 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 PIGKQ92643 395 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 MRI1Q9BV20 369 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 MTIF3Q9H2K0 278 aaKnown RBP17.19■□□□□ 0.34
CBX1-202ENST00000393408 TCEAL2Q9H3H9 227 aaPredicted RBP17.19■□□□□ 0.34
CBX1-202ENST00000393408 FBXL3Q9UKT7 428 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 ZNF346Q9UL40 294 aaKnown RBP17.19■□□□□ 0.34
CBX1-202ENST00000393408 KLHDC2Q9Y2U9 406 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 F5P12259 2224 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 DNAH14Q0VDD8 3507 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 A0A0A6YYC8 382 aaPredicted RBP17.19■□□□□ 0.34
CBX1-202ENST00000393408 I3L1I5 382 aaPredicted RBP17.19■□□□□ 0.34
CBX1-202ENST00000393408 PRAMEF2O60811 474 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 CFDP00746 253 aaPredicted RBP17.19■□□□□ 0.34
CBX1-202ENST00000393408 M6PRP20645 277 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 SLC25A1P53007 311 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 RPS15P62841 145 aaKnown RBP17.19■□□□□ 0.34
CBX1-202ENST00000393408 IGLV3-21P80748 117 aaPredicted RBP17.19■□□□□ 0.34
CBX1-202ENST00000393408 MRPS10P82664 201 aaKnown RBP17.19■□□□□ 0.34
CBX1-202ENST00000393408 TMEM69Q5SWH9 247 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 KIAA1324Q6UXG2 1013 aaKnown RBP17.19■□□□□ 0.34
CBX1-202ENST00000393408 STAC2Q6ZMT1 411 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 SLC16A9Q7RTY1 509 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 OR2T4Q8NH00 348 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 CEP76Q8TAP6 659 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 HAVCR1Q96D42 359 aa17.19■□□□□ 0.34
CBX1-202ENST00000393408 CDCP1Q9H5V8 836 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms