RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 DESI2Q9BSY9 194 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ALG12Q9BV10 488 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 RIOK2Q9BVS4 552 aaKnown RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ACAT2Q9BWD1 397 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF717Q9BY31 904 aaPredicted RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 DNTTIP1Q9H147 329 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 RHBGQ9H310 441 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 RPP21Q9H633 154 aaKnown RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC40A1Q9NP59 571 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 YAE1D1Q9NRH1 226 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 QPCTLQ9NXS2 382 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 CGNQ9P2M7 1197 aaKnown RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF230Q9UIE0 474 aaPredicted RBP0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 NPIPA1Q9UND3 350 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 MGAT4BQ9UQ53 548 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 OTOGLQ3ZCN5 2332 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 NFASCO94856 1347 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 UBE4BO95155 1302 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 LRP4O75096 1905 aa0.6□□□□□ -2.31
SNORD28B-201ENST00000390993 NID2Q14112 1375 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 NLRC5Q86WI3 1866 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 IGLV1-50A0A075B6I6 118 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 NSG1A0A0A6YYJ2 146 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 VSTM2BA6NLU5 285 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF850A8MQ14 1090 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 G3V4G9 280 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 UBXN8O00124 270 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 RASGRF2O14827 1237 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 RS1O15537 224 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 CD5LO43866 347 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 VPS26AO75436 327 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 STAMBPO95630 424 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 OLFM2O95897 454 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 IGF1P05019 195 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 OR56A5P0C7T3 313 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 LINC00869P0C866 280 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 PRPS2P11908 318 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 CD99P14209 185 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 DCKP27707 260 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 IL12AP29459 219 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 PTGDSP41222 190 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 PTGFRP43088 359 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 NUCB2P80303 420 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 PRKCDQ05655 676 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC39A6Q13433 755 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 SGCAQ16586 387 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 FAM78AQ5JUQ0 283 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF684Q5T5D7 378 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 HES5Q5TA89 166 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 RAET1GQ6H3X3 334 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 LCN12Q6JVE5 192 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 CES3Q6UWW8 571 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 UTS2BQ765I0 119 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 STRADAQ7RTN6 431 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 PRSS41Q7RTY9 318 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 MOB3BQ86TA1 216 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 TRIM69Q86WT6 500 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 RIMKLAQ8IXN7 391 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 CLEC4FQ8N1N0 589 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 LRRC52Q8N7C0 313 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 MSANTD4Q8NCY6 345 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 DENND6BQ8NEG7 585 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC13A3Q8WWT9 602 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 TM4SF18Q96CE8 201 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 TVP23CQ96ET8 276 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 AURKBQ96GD4 344 aaPredicted RBP0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 ITCHQ96J02 903 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 C7orf34Q96L11 122 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 TSSK3Q96PN8 268 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 CAMK2N2Q96S95 79 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 NIPSNAP3BQ9BS92 247 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 FRMD8P1Q9BZ68 369 aaPredicted RBP0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 RAB34Q9BZG1 259 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 PARP12Q9H0J9 701 aaKnown RBP0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 DEFB127Q9H1M4 99 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 RBKSQ9H477 322 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 RHOJQ9H4E5 214 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 ECT2Q9H8V3 914 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 ACTR8Q9H981 624 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 MCCC2Q9HCC0 563 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 AGPAT5Q9NUQ2 364 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 DDX19AQ9NUU7 478 aaKnown RBP0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 EXD2Q9NVH0 621 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 GNG12Q9UBI6 72 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 MTRRQ9UBK8 725 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 SEC14L3Q9UDX4 400 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 CRCT1Q9UGL9 99 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 ENOPH1Q9UHY7 261 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 STAP1Q9ULZ2 295 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 NUDCQ9Y266 331 aa0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 CARHSP1Q9Y2V2 147 aaKnown RBP0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 SAMHD1Q9Y3Z3 626 aaKnown RBP0.59□□□□□ -2.31
SNORD28B-201ENST00000390993 SPAG9O60271 1321 aaKnown RBP0.59□□□□□ -2.32
SNORD28B-201ENST00000390993 SHROOM3Q8TF72 1996 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 SDK2Q58EX2 2172 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 IGHV5-10-1A0A0J9YXX1 117 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 RNF103-CHMP3A0A140T963 221 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 A0A1B0GW55 424 aa0.58□□□□□ -2.32
SNORD28B-201ENST00000390993 CIB4A0PJX0 185 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms