RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 U2AF2P26368 475 aaKnown RBP eCLIP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 NMT1P30419 496 aaKnown RBP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 HOXA9P31269 272 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 EVI2BP34910 448 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 NUP62P37198 522 aaPredicted RBP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 HTR2BP41595 481 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 CDKN1BP46527 198 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 SLC11A1P49279 550 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 PRMT2P55345 433 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 ACTR3P61158 418 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 DR1Q01658 176 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 BDH1Q02338 343 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 RGS1Q08116 209 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 PPIDQ08752 370 aaKnown RBP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 SLC10A7Q0GE19 358 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 DNAJC3Q13217 504 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 COTL1Q14019 142 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 GNA13Q14344 377 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 LAGE3Q14657 143 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 ZMYND11Q15326 602 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 CHI3L2Q15782 390 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 DEFB116Q30KQ4 102 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 Q3ZCU0 254 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 NKAIN1Q4KMZ8 207 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 FAM74A3Q4VXF1 159 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 CFAP157Q5JU67 520 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 HHATQ5VTY9 493 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 C1orf146Q5VVC0 180 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 ATL3Q6DD88 541 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 SCYL2Q6P3W7 929 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 DEGS2Q6QHC5 323 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 LRRC70Q7Z2Q7 622 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 BIVMQ86UB2 503 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 RALGPS2Q86X27 583 aaPredicted RBP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF573Q86YE8 665 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 NRMQ8IXM6 262 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 C12orf56Q8IXR9 622 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 TCAIMQ8N3R3 496 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 BHLHE23Q8NDY6 225 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 STKLD1Q8NE28 680 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 CLHC1Q8NHS4 586 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 DDI1Q8WTU0 396 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 SDSLQ96GA7 329 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 TPD52L3Q96J77 140 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 KCNA7Q96RP8 456 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 HDHD3Q9BSH5 251 aaPredicted RBP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 METTL7AQ9H8H3 244 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 ECT2Q9H8V3 914 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 UCK1Q9HA47 277 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 LY9Q9HBG7 655 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 EML4Q9HC35 981 aaKnown RBP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 PALMDQ9NP74 551 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 NRBP2Q9NSY0 501 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 NUDT15Q9NV35 164 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 WRAP73Q9P2S5 460 aaPredicted RBP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 CYTH4Q9UIA0 394 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 SNX6Q9UNH7 406 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 STRAPQ9Y3F4 350 aaKnown RBP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 ATP6V1DQ9Y5K8 247 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 PLEKHG2Q9H7P9 1386 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 A0A075B6Q4 140 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 A0A087WZY1 265 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 C15orf38-AP3S2A0A0A6YYH1 394 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 A0A0U1RQS6 177 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 LOC100506127A0A0U1RQW1 187 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 A0A1B0GTQ1 180 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 CFAP73A6NFT4 308 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 WASHC1A8K0Z3 465 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 COLCA2A8K830 154 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 LGALS8O00214 317 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 HCRTR1O43613 425 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 SULT1B1O43704 296 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 LANCL1O43813 399 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 TOM1L1O75674 476 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 CRTAPO75718 401 aaPredicted RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 CSTAP01040 98 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 OPN1LWP04000 364 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 GLAP06280 429 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 CRYGCP07315 174 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 PLEKP08567 350 aaPredicted RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 IQCF3P0C7M6 154 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 RALBP11234 206 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 PRPS2P11908 318 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 BDKRB1P46663 353 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 DSTNP60981 165 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 CSTF1Q05048 431 aaKnown RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 PDZK1IP1Q13113 114 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 SRSF5Q13243 272 aaKnown RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 SNTB2Q13425 540 aaKnown RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 XRCC4Q13426 336 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 EXOSC2Q13868 293 aaKnown RBP1.6□□□□□ -2.15
TRAV40-201ENST00000390467 CHRNA6Q15825 494 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 BCL2A1Q16548 175 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 NADK2Q4G0N4 442 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 BCL7AQ4VC05 210 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 KRTAP13-2Q52LG2 175 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 C10orf120Q5SQS8 335 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 ARMC12Q5T9G4 340 aa1.6□□□□□ -2.15
TRAV40-201ENST00000390467 RAET1GQ6H3X3 334 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms