RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 DDX39BQ13838 428 aaKnown RBP6.85□□□□□ -1.31
TRBV28-201ENST00000390400 KCNAB1Q14722 419 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 RFTN2Q52LD8 501 aaPredicted RBP6.85□□□□□ -1.31
TRBV28-201ENST00000390400 SGO1Q5FBB7 561 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 PABPC1L2AQ5JQF8 200 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 FAM69AQ5T7M9 428 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 HES3Q5TGS1 186 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 FRG2Q64ET8 278 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 C12orf73Q69YU5 71 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 FRMPD2BQ6IN97 320 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 PYHIN1Q6K0P9 492 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 FAM198BQ6UWH4 519 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 TPRA1Q86W33 373 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 FAM90A1Q86YD7 464 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 LAS2Q8IYD9 372 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 SLC34A3Q8N130 599 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 ZNF740Q8NDX6 193 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 FAM71CQ8NEG0 241 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 GOT1L1Q8NHS2 421 aaPredicted RBP6.85□□□□□ -1.31
TRBV28-201ENST00000390400 SELENOMQ8WWX9 145 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 RFT1Q96AA3 541 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 ORAI1Q96D31 301 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 ZBED6CLQ96FA7 236 aaPredicted RBP6.85□□□□□ -1.31
TRBV28-201ENST00000390400 WBP1Q96G27 269 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 SLC38A2Q96QD8 506 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 FRG2BQ96QU4 278 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 PIP5K1AQ99755 562 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 CNPPD1Q9BV87 410 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 SPATA5L1Q9BVQ7 753 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 POLDIP3Q9BY77 421 aaKnown RBP6.85□□□□□ -1.31
TRBV28-201ENST00000390400 POLR2J2Q9GZM3 115 aaKnown RBP6.85□□□□□ -1.31
TRBV28-201ENST00000390400 RHBGQ9H310 441 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 OR51J1Q9H342 316 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 FAM60AQ9NP50 221 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 EXOSC4Q9NPD3 245 aaKnown RBP6.85□□□□□ -1.31
TRBV28-201ENST00000390400 EQTNQ9NQ60 294 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 BIN3Q9NQY0 253 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 CYSLTR2Q9NS75 346 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 EXD2Q9NVH0 621 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 SDHAF2Q9NX18 166 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 SEC14L3Q9UDX4 400 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 PURGQ9UJV8 347 aaKnown RBP6.85□□□□□ -1.31
TRBV28-201ENST00000390400 KCND3Q9UK17 655 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 PILRAQ9UKJ1 303 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 PLCL2Q9UPR0 1127 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 SNX8Q9Y5X2 465 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 PTGDR2Q9Y5Y4 395 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 CACNG2Q9Y698 323 aa6.85□□□□□ -1.31
TRBV28-201ENST00000390400 COL27A1Q8IZC6 1860 aaPredicted RBP6.85□□□□□ -1.31
TRBV28-201ENST00000390400 SCN3AQ9NY46 2000 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 ADAMTS20P59510 1910 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 DMXL1Q9Y485 3027 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 LOC105369274A0A096LPK9 316 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 LOC102723532A0A0G2JNH3 316 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 EFCAB7A8K855 629 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 A8MV72 311 aaPredicted RBP6.84□□□□□ -1.31
TRBV28-201ENST00000390400 TMEM150CB9EJG8 249 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 H0YGG7 62 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 H7C2Y5 167 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 FOXE1O00358 373 aaPredicted RBP6.84□□□□□ -1.31
TRBV28-201ENST00000390400 NDUFS4O43181 175 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 ZNF749O43361 778 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 AKR7A2O43488 359 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 LCMT2O60294 686 aaKnown RBP6.84□□□□□ -1.31
TRBV28-201ENST00000390400 SRPX2O60687 465 aaPredicted RBP6.84□□□□□ -1.31
TRBV28-201ENST00000390400 CDRT1O95170 752 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 OR5F1O95221 314 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 SERPIND1P05546 499 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 HSMCR30P0CW71 290 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 BCKDHAP12694 445 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 FOLR1P15328 257 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 DNASE1P24855 282 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 TGFBR1P36897 503 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 IDH2P48735 452 aaKnown RBP6.84□□□□□ -1.31
TRBV28-201ENST00000390400 CLDN6P56747 220 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 VSX2P58304 361 aaPredicted RBP6.84□□□□□ -1.31
TRBV28-201ENST00000390400 AP3S2P59780 193 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 ARF3P61204 181 aaPredicted RBP6.84□□□□□ -1.31
TRBV28-201ENST00000390400 MRPS10P82664 201 aaKnown RBP6.84□□□□□ -1.31
TRBV28-201ENST00000390400 ACY1Q03154 408 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 ZNF91Q05481 1191 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 HNRNPA0Q13151 305 aaKnown RBP6.84□□□□□ -1.31
TRBV28-201ENST00000390400 CAMK2DQ13557 499 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 STK11Q15831 433 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 KCNMB1Q16558 191 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 ISXQ2M1V0 245 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 ZNF630Q2M218 657 aaPredicted RBP6.84□□□□□ -1.31
TRBV28-201ENST00000390400 DEFB110Q30KQ9 67 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 FLYWCH1Q4VC44 716 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 CRB2Q5IJ48 1285 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 ELFN2Q5R3F8 820 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 METTL11BQ5VVY1 283 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 FAM219BQ5XKK7 198 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 RGS7BPQ6MZT1 257 aaPredicted RBP6.84□□□□□ -1.31
TRBV28-201ENST00000390400 FBXO42Q6P3S6 717 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 C3P1Q6ZMU1 363 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 PTCHD4Q6ZW05 846 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 BTN2A1Q7KYR7 527 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 RAB11FIP2Q7L804 512 aa6.84□□□□□ -1.31
TRBV28-201ENST00000390400 TMPRSS12Q86WS5 348 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms