RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 LRRC69Q6ZNQ3 347 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 GPAT4Q86UL3 456 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 SLC35F3Q8IY50 421 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 C14orf79Q96F83 325 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 WDR89Q96FK6 387 aaPredicted RBP13.18□□□□□ -0.3
RTF1-201ENST00000389629 SULT4A1Q9BR01 284 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 A0A1W2PQU0 124 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 PPM1DO15297 605 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 HCRTR2O43614 444 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 RIDAP52758 137 aaKnown RBP13.18□□□□□ -0.3
RTF1-201ENST00000389629 SLC9A3R2Q15599 337 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 RHOUQ7L0Q8 258 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 C12orf76Q8N812 135 aaPredicted RBP13.18□□□□□ -0.3
RTF1-201ENST00000389629 PNLDC1Q8NA58 520 aaKnown RBP13.18□□□□□ -0.3
RTF1-201ENST00000389629 PTDSS2Q9BVG9 487 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 ULBP3Q9BZM4 244 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 SLC25A19Q9HC21 320 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 APMAPQ9HDC9 416 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 RPH3AQ9Y2J0 694 aaPredicted RBP13.18□□□□□ -0.3
RTF1-201ENST00000389629 ZNF175Q9Y473 711 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 H7C1C5 153 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 IFNA17P01571 189 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 OR2T7P0C7T2 308 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 CST5P28325 142 aaPredicted RBP13.18□□□□□ -0.3
RTF1-201ENST00000389629 IRS1P35568 1242 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 LCN6P62502 163 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 GSG1Q2KHT4 349 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 TUSC1Q2TAM9 212 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 HNRNPA1L2Q32P51 320 aaKnown RBP13.18□□□□□ -0.3
RTF1-201ENST00000389629 TMEM200AQ86VY9 491 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 TMEFF1Q8IYR6 380 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 OR2T27Q8NH04 317 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 ZNF578Q96N58 590 aaPredicted RBP13.18□□□□□ -0.3
RTF1-201ENST00000389629 OR2M4Q96R27 311 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 PIGMQ9H3S5 423 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 KCNJ16Q9NPI9 418 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 KCMF1Q9P0J7 381 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 POLR2AP24928 1970 aaKnown RBP13.18□□□□□ -0.3
RTF1-201ENST00000389629 CLUP10909 449 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 MAOBP27338 520 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 CYCSP99999 105 aaKnown RBP13.17□□□□□ -0.3
RTF1-201ENST00000389629 ADAM5Q6NVV9 412 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 FAM111BQ6SJ93 734 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 TECPR1Q7Z6L1 1165 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 ARRDC3Q96B67 414 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 TCEAL7Q9BRU2 100 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 ZNF629Q9UEG4 869 aaPredicted RBP13.17□□□□□ -0.3
RTF1-201ENST00000389629 IGLV3-16A0A075B6K0 115 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 SURF4O15260 269 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 SLC2A5P22732 501 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 PRKAR1BP31321 381 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 BSGP35613 385 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 PCBP3P57721 371 aaKnown RBP13.17□□□□□ -0.3
RTF1-201ENST00000389629 CBFBQ13951 182 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 NHLRC1Q6VVB1 395 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 CDH26Q8IXH8 852 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 OR8D2Q9GZM6 311 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 HRASLS2Q9NWW9 162 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 SULT1C2O00338 296 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 HYAL3O43820 417 aaPredicted RBP13.17□□□□□ -0.3
RTF1-201ENST00000389629 AK1P00568 194 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 F13BP05160 661 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 HOXB5P09067 269 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 OR8U9P0C7N5 309 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 CHRFAM7AQ494W8 412 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 ALG10Q5BKT4 473 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 PDSS1Q5T2R2 415 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 NIPAL3Q6P499 406 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 ZNF565Q8N9K5 539 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 ARL5BQ96KC2 179 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 SDHCQ99643 169 aaPredicted RBP13.17□□□□□ -0.3
RTF1-201ENST00000389629 PITHD1Q9GZP4 211 aaPredicted RBP13.17□□□□□ -0.3
RTF1-201ENST00000389629 POFUT1Q9H488 388 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 ACKR4Q9NPB9 350 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 A0A1B0GUH1 482 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 SELENOFO60613 162 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 PAPLNO95428 1278 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 H2BFMP0C1H6 154 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 GAAP10253 952 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 IRF4Q15306 451 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 TMEM65Q6PI78 240 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 DGLUCYQ7Z3D6 616 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 PLA2G15Q8NCC3 412 aa13.17□□□□□ -0.3
RTF1-201ENST00000389629 ATF1P18846 271 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 SNTB1Q13884 538 aaKnown RBP13.16□□□□□ -0.3
RTF1-201ENST00000389629 ALG14Q96F25 216 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 C20orf24Q9BUV8 137 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 LTBP4Q8N2S1 1624 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 NPIPA5E9PKD4 350 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 HPXP02790 462 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 CTSAP10619 480 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 TMEM201Q5SNT2 666 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 KIAA0907Q7Z7F0 614 aaPredicted RBP13.16□□□□□ -0.3
RTF1-201ENST00000389629 KLHL15Q96M94 604 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 PARP12Q9H0J9 701 aaKnown RBP13.16□□□□□ -0.3
RTF1-201ENST00000389629 SCPEP1Q9HB40 452 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 NPIPA1Q9UND3 350 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 A0A1W2PR48 441 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 TSPAN11A1L157 253 aa13.16□□□□□ -0.3
RTF1-201ENST00000389629 AIPO00170 330 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms