RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 A0A1W2PPE3 182 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 BHLHE40O14503 412 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 PIN1P1O15428 100 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 MAGEB4O15481 346 aaPredicted RBP13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 TXNL1O43396 289 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 CTSAP10619 480 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 PTNP21246 168 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 ABCD3P28288 659 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 MAPK8P45983 427 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 FABP9Q0Z7S8 132 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 NDUFAF6Q330K2 333 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 C4orf46Q504U0 113 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 TP53I3Q53FA7 332 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 OR2B11Q5JQS5 317 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 GDF7Q7Z4P5 450 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 GLB1L2Q8IW92 636 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 TMEM159Q96B96 161 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 FBXO17Q96EF6 278 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 TMEM41AQ96HV5 264 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 OR52D1Q9H346 318 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 CCDC86Q9H6F5 360 aaKnown RBP13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 APMAPQ9HDC9 416 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 NOX4Q9NPH5 578 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 UQCC1Q9NVA1 299 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 ZNF337Q9Y3M9 751 aa13.46□□□□□ -0.26
VPS9D1-201ENST00000389386 RNF222A6NCQ9 220 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 SFTPCP11686 197 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 PPT1P50897 306 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 CXADRP78310 365 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 PCGF3Q3KNV8 242 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 VRK2Q86Y07 508 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 RFLNBQ8N5W9 214 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 OR4A4PQ8NGN8 299 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 ING5Q8WYH8 240 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 SCAMP4Q969E2 229 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 SPSB2Q99619 263 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 WDR77Q9BQA1 342 aaPredicted RBP13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 TREM1Q9NP99 234 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 ZCCHC3Q9NUD5 404 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 GOLGA4Q13439 2230 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 LINC01553A4QN01 128 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 TSPAN6O43657 245 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 KLK3P07288 261 aaPredicted RBP13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 CD79AP11912 226 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 SLC25A4P12235 298 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 TEAD1P28347 426 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 KHKP50053 298 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 ST8SIA6P61647 398 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 SLC7A9P82251 487 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 C22orf39Q6P5X5 142 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 STX12Q86Y82 276 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 ZNF433Q8N7K0 673 aaPredicted RBP13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 ARL11Q969Q4 196 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 MRPL38Q96DV4 380 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 PELI1Q96FA3 418 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 SGPP1Q9BX95 441 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 TTTY10Q9BZA0 68 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 SLC25A18Q9H1K4 315 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 C2orf42Q9NWW7 574 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 AHSPQ9NZD4 102 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 SLC13A4Q9UKG4 626 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 PLEKHA6Q9Y2H5 1048 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 DMRT1Q9Y5R6 373 aa13.45□□□□□ -0.26
VPS9D1-201ENST00000389386 CCDC85CA6NKD9 419 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 ZNF879B4DU55 563 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 H7C417 338 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 CLN5O75503 358 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 RBBP9O75884 186 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 TBX6O95947 436 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 CA3P07451 260 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 CLUP10909 449 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 FUT1P19526 365 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 PAX6P26367 422 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 PDHA2P29803 388 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 PGDP52209 483 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 C21orf62-AS1Q17RA5 79 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 LIN54Q6MZP7 749 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 LILRA6Q6PI73 481 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 ACOT7LQ6ZUV0 252 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 LNX2Q8N448 690 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 WDSUB1Q8N9V3 476 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 C15orf40Q8WUR7 153 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 ZCCHC2Q9C0B9 1178 aaKnown RBP13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 C1orf198Q9H425 327 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 SUV39H2Q9H5I1 410 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 TMEM231Q9H6L2 316 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 C8orf33Q9H7E9 229 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 MTFP1Q9UDX5 166 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 WNT6Q9Y6F9 365 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 NUDT19A8MXV4 375 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 FADS1O60427 444 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 CTNSO60931 367 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 PRKRAO75569 313 aaKnown RBP13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 GKN3PP0CG01 181 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 MUC1P15941 1255 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 MPIP34949 423 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 PRKAG1P54619 331 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 STARD6P59095 220 aa13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 SNRPD1P62314 119 aaKnown RBP13.44□□□□□ -0.26
VPS9D1-201ENST00000389386 SIRPAP78324 504 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms