RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 PTPRTO14522 1441 aa0.72□□□□□ -2.29
RNU6-1040P-201ENST00000383974 ABCC4O15439 1325 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 GPATCH8Q9UKJ3 1502 aaKnown RBP0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 NSG1A0A0A6YYJ2 146 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 KINO60870 393 aaKnown RBP0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 CA3P07451 260 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 RRASP10301 218 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 PGCP20142 388 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 MUTP22033 750 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 CALCRP30988 508 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 CX3CR1P49238 355 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 EWSR1Q01844 656 aaKnown RBP eCLIP0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 GABPB1Q06547 395 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 LOXL1Q08397 574 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ASPHQ12797 758 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 RPA4Q13156 261 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 TTLL9Q3SXZ7 439 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 OR2G6Q5TZ20 316 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 HCP5Q6MZN7 132 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 THOC6Q86W42 341 aaKnown RBP0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 SNX32Q86XE0 403 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 CBWD2Q8IUF1 395 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 LRRC52Q8N7C0 313 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 RNF148Q8N7C7 305 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 OR10G4Q8NGN3 311 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 GIPC3Q8TF64 312 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 RTN4IP1Q8WWV3 396 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 FCGR1BQ92637 280 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 WFIKKN1Q96NZ8 548 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 TIMM29Q9BSF4 260 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 RIOK2Q9BVS4 552 aaKnown RBP0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ATG10Q9H0Y0 220 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 DHX33Q9H6R0 707 aaKnown RBP0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 GORASP2Q9H8Y8 452 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 WDR76Q9H967 626 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ROPN1Q9HAT0 212 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 YAE1D1Q9NRH1 226 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 GLRX2Q9NS18 164 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 AIPL1Q9NZN9 384 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 CUX2O14529 1486 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 TNS2Q63HR2 1409 aa0.71□□□□□ -2.3
RNU6-1040P-201ENST00000383974 TRDCB7Z8K6 153 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 H3BNH8 94 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 XKRYO14609 159 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 CXCL13O43927 109 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ALDOBP05062 364 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 HSP90AA1P07900 732 aaKnown RBP0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 CSF3P09919 207 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 GKN3PP0CG01 181 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 TPSB2P20231 275 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 AHCYP23526 432 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 PTGFRP43088 359 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 SLC26A5P58743 744 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ACVR1Q04771 509 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 FZD2Q14332 565 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 TPSAB1Q15661 275 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 OR6B2Q6IFH4 312 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ETFRF1Q6IPR1 90 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 NCCRP1Q6ZVX7 275 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 LHFPL4Q7Z7J7 247 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ZNF664Q8N3J9 261 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 TMEM104Q8NE00 496 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 CATSPER1Q8NEC5 780 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 HTR3CQ8WXA8 447 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ACOT11Q8WXI4 607 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 SEC22AQ96IW7 307 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 RANBP3Q9H6Z4 567 aaPredicted RBP0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 HMG20AQ9NP66 347 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 IL26Q9NPH9 171 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 GPATCH2LQ9NWQ4 482 aa0.7□□□□□ -2.3
RNU6-1040P-201ENST00000383974 COL11A1P12107 1806 aaPredicted RBP0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 CFAP73A6NFT4 308 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 H0YHG0 523 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 CCNE2O96020 404 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 POLR2EP19388 210 aaKnown RBP0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 TBXA2RP21731 343 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 SFNP31947 248 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 NCBP2P52298 156 aaKnown RBP eCLIP0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 SLC7A9P82251 487 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ERCC8Q13216 396 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ZBED5Q49AG3 693 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 CCDC40Q4G0X9 1142 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 SAMD4BQ5PRF9 694 aaKnown RBP0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 LDLRAP1Q5SW96 308 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 HES5Q5TA89 166 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 KDM7AQ6ZMT4 941 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ZNF546Q86UE3 836 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 IQCA1Q86XH1 822 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 NKAIN3Q8N8D7 197 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 OR56B1Q8NGI3 324 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 C12orf66Q96MD2 445 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 NSMCE2Q96MF7 247 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 VPS35Q96QK1 796 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 MRPL45Q9BRJ2 306 aaKnown RBP0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 GSDMCQ9BYG8 508 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ACTR6Q9GZN1 396 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 ACTR8Q9H981 624 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 SYTL2Q9HCH5 934 aa0.69□□□□□ -2.3
RNU6-1040P-201ENST00000383974 MID1IP1Q9NPA3 183 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms