RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 TMEM225Q6GV28 225 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 OR2A2Q6IF42 318 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 PGBD2Q6P3X8 592 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 GPAT4Q86UL3 456 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 GTF2IRD2Q86UP8 949 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 CCDC71Q8IV32 467 aaPredicted RBP11.28□□□□□ -0.6
SMN1-202ENST00000380707 TUSC5Q8IXB3 177 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 CDK20Q8IZL9 346 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 HS3ST5Q8IZT8 346 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 RND1Q92730 232 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 PKP2Q99959 881 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 SEMA6AQ9H2E6 1030 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 TAS2R5Q9NYW4 299 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 B3GAT1Q9P2W7 334 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 SLC5A6Q9Y289 635 aa11.28□□□□□ -0.6
SMN1-202ENST00000380707 MAGED1Q9Y5V3 778 aaPredicted RBP11.28□□□□□ -0.6
SMN1-202ENST00000380707 DIDO1Q9BTC0 2240 aaKnown RBP11.27□□□□□ -0.6
SMN1-202ENST00000380707 IGKV3D-15A0A087WSY6 115 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 BLOC1S5-TXNDC5H3BN57 136 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 SS18L1O75177 396 aaPredicted RBP11.27□□□□□ -0.61
SMN1-202ENST00000380707 PLGP00747 810 aaPredicted RBP11.27□□□□□ -0.61
SMN1-202ENST00000380707 HIST1H2ABP04908 130 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 TSPAN19P0C672 248 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 ADORA3P0DMS8 318 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 TMIGD3P0DMS9 266 aaPredicted RBP11.27□□□□□ -0.61
SMN1-202ENST00000380707 HLA-DOBP13765 273 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 KIR2DL2P43627 348 aaPredicted RBP11.27□□□□□ -0.61
SMN1-202ENST00000380707 SLC16A1P53985 500 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 ELF3P78545 371 aaPredicted RBP11.27□□□□□ -0.61
SMN1-202ENST00000380707 GK3PQ14409 553 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 C1orf94Q6P1W5 598 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 HIST3H2AQ7L7L0 130 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 OAFQ86UD1 273 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 MCEMP1Q8IX19 187 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 LINC00471Q8N535 108 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 ADPRHL1Q8NDY3 354 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 OR9K2Q8NGE7 335 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 OR13C2Q8NGS9 318 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 OR51A7Q8NH64 312 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 STMN2Q93045 179 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 HIST1H2ACQ93077 130 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 GMPPAQ96IJ6 420 aaPredicted RBP11.27□□□□□ -0.61
SMN1-202ENST00000380707 TNFRSF13CQ96RJ3 184 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 BDH2Q9BUT1 245 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 BCO1Q9HAY6 547 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 KRCC1Q9NPI7 259 aaPredicted RBP11.27□□□□□ -0.61
SMN1-202ENST00000380707 PDP1Q9P0J1 537 aaPredicted RBP11.27□□□□□ -0.61
SMN1-202ENST00000380707 KLHL9Q9P2J3 617 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 RASD1Q9Y272 281 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 TMEM5Q9Y2B1 443 aa11.27□□□□□ -0.61
SMN1-202ENST00000380707 TRAV27A0A087WT01 109 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 A0A1W2PNV4 684 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 HSPB2A8KAH6 182 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 C11orf98E9PRG8 122 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 PTP4A3O75365 173 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 TNFSF13O75888 250 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 VAMP5O95183 116 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 YES1P07947 543 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 POU2F1P14859 743 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 PRKACGP22612 351 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 AHCYP23526 432 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 CTSSP25774 331 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 AGTR1P30556 359 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 UQCRC1P31930 480 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 NTF4P34130 210 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 IFNGR2P38484 337 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 AQP2P41181 271 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 RPS4XP62701 263 aaKnown RBP11.26□□□□□ -0.61
SMN1-202ENST00000380707 RPL18Q07020 188 aaKnown RBP11.26□□□□□ -0.61
SMN1-202ENST00000380707 SRSF1Q07955 248 aaKnown RBP eCLIP11.26□□□□□ -0.61
SMN1-202ENST00000380707 PUDPQ08623 228 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 PDK3Q15120 406 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 HSPB2Q16082 182 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 MTFR2Q6P444 385 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 SHQ1Q6PI26 577 aaKnown RBP11.26□□□□□ -0.61
SMN1-202ENST00000380707 FAM214BQ7L5A3 538 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 NANOGNBQ7Z5D8 188 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 LIX1LQ8IVB5 337 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 CNEP1R1Q8N9A8 125 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 ZIC4Q8N9L1 334 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 AQP11Q8NBQ7 271 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 OR10G2Q8NGC3 310 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 MOSPD2Q8NHP6 518 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 GIPC3Q8TF64 312 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 CENPNQ96H22 339 aaPredicted RBP11.26□□□□□ -0.61
SMN1-202ENST00000380707 ZFP3Q96NJ6 502 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 FEVQ99581 238 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 SF3B5Q9BWJ5 86 aaKnown RBP11.26□□□□□ -0.61
SMN1-202ENST00000380707 GLRX2Q9NS18 164 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 RNF6Q9Y252 685 aa11.26□□□□□ -0.61
SMN1-202ENST00000380707 FASNP49327 2511 aaKnown RBP11.26□□□□□ -0.61
SMN1-202ENST00000380707 LOC102725191A0A1B0GVB3 256 aa11.25□□□□□ -0.61
SMN1-202ENST00000380707 ZNF724A8MTY0 619 aa11.25□□□□□ -0.61
SMN1-202ENST00000380707 RNF13O43567 381 aa11.25□□□□□ -0.61
SMN1-202ENST00000380707 ZG16O60844 167 aa11.25□□□□□ -0.61
SMN1-202ENST00000380707 OR6A2O95222 327 aa11.25□□□□□ -0.61
SMN1-202ENST00000380707 CRHP06850 196 aa11.25□□□□□ -0.61
SMN1-202ENST00000380707 ZNF26P17031 533 aaPredicted RBP11.25□□□□□ -0.61
SMN1-202ENST00000380707 FPR3P25089 353 aa11.25□□□□□ -0.61
SMN1-202ENST00000380707 GSSP48637 474 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms