RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 OR6K6Q8NGW6 343 aa7.26□□□□□ -1.25
PDLIM5-204ENST00000380176 KTI12Q96EK9 354 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-204ENST00000380176 SLC46A1Q96NT5 459 aa7.26□□□□□ -1.25
PDLIM5-204ENST00000380176 PELOQ9BRX2 385 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-204ENST00000380176 NMNAT2Q9BZQ4 307 aa7.26□□□□□ -1.25
PDLIM5-204ENST00000380176 KLHL21Q9UJP4 597 aa7.26□□□□□ -1.25
PDLIM5-204ENST00000380176 MRPS17Q9Y2R5 130 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-204ENST00000380176 CACNA1CQ13936 2221 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 A0A087WV48 116 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 A8MV72 311 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 NUDT21O43809 227 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 PPM1BO75688 479 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 EIF4EP06730 217 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 DCNP07585 359 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 CELA3AP09093 270 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 F8A1P23610 371 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 PSMB10P40306 273 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 NR4A2P43354 598 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 DIO1P49895 249 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 ACTC1P68032 377 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 ACTA1P68133 377 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF117Q03924 483 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 GGTLC2Q14390 218 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 NSDHLQ15738 373 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 YOD1Q5VVQ6 348 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 POMZP3Q6PJE2 187 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 LANCL3Q6ZV70 420 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 TMPRSS9Q7Z410 1059 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 SLC35F2Q8IXU6 374 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 D2HGDHQ8N465 521 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF527Q8NB42 609 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 KIAA1143Q96AT1 154 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 ORAI1Q96D31 301 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 OR1F2PQ96R84 312 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 CNN2Q99439 309 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 NUDT22Q9BRQ3 303 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 PCED1AQ9H1Q7 454 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 PRO3102Q9H379 93 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 MMP25Q9NPA2 562 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 RPRD1BQ9NQG5 326 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 ACOXLQ9NUZ1 547 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 RASD1Q9Y272 281 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 MMACHCQ9Y4U1 282 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 A0A0B4J293 547 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 A0A0G2JMP0 313 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 A0A0X1KG70 313 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 TCRBV16S1A1N1A0A5B0 115 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 MEIOCA2RUB1 952 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 FRG2CA6NGY1 282 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 FAM25AB3EWG3 89 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 FAM25CB3EWG5 89 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 FAM25GB3EWG6 89 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 B4DXG7 233 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 DCTN6O00399 190 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 KHNYNO15037 678 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 ARPC3O15145 178 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 BCAT2O15382 392 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 CCNKO75909 580 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 OR2T7P0C7T2 308 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 S100A1P23297 94 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 TACR3P29371 465 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 NR0B1P51843 470 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 NRG3P56975 720 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 POU4F2Q12837 409 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 EBPQ15125 230 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 PON3Q15166 354 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 LINC01590Q5TEZ4 76 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 C1QL3Q5VWW1 255 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 HBMQ6B0K9 141 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 SFXN4Q6P4A7 337 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 MZT2AQ6P582 158 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 LEG1Q6P5S2 330 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 FAM122BQ7Z309 247 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 MARCH3Q86UD3 253 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 RAB43Q86YS6 212 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 PLXDC1Q8IUK5 500 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF440Q8IYI8 595 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 SLC43A2Q8N370 569 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 LRRC75AQ8NAA5 344 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF511Q8NB15 262 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 OR4M2Q8NGB6 313 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 OR2T27Q8NH04 317 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 OR14A16Q8NHC5 309 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 PDCD1LG2Q9BQ51 273 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 SLC22A4Q9H015 551 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 NANSQ9NR45 359 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 EXTL2Q9UBQ6 330 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 GNG8Q9UK08 70 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 NOX1Q9Y5S8 564 aa7.25□□□□□ -1.25
PDLIM5-204ENST00000380176 H7C1C5 153 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 OGG1O15527 345 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 DUX1O43812 170 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ASAH2BP0C7U1 165 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 TFPIP10646 304 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 GLB1P16278 677 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 FBLP22087 321 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 GRK6P43250 576 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 MAGEB1P43366 347 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 RPS5P46782 204 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 AFF3P51826 1226 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms