RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TUBG2Q9NRH3 451 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 C14orf119Q9NWQ9 140 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 TECTAO75443 2155 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 CEP250Q9BV73 2442 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 A0A1W2PRG6 482 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 CLDN25C9JDP6 229 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF701M0R085 212 aaPredicted RBP9.9□□□□□ -0.82
NEDD9-201ENST00000379433 OIP5O43482 229 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 HRO43593 1189 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 NSA2O95478 260 aaKnown RBP9.9□□□□□ -0.82
NEDD9-201ENST00000379433 GBX2P52951 348 aaPredicted RBP9.9□□□□□ -0.82
NEDD9-201ENST00000379433 PLAURQ03405 335 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 CD226Q15762 336 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 SLC46A3Q7Z3Q1 461 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 KLBQ86Z14 1044 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 PLXDC1Q8IUK5 500 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF687Q8N1G0 1237 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 SLC25A36Q96CQ1 311 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 ELF4Q99607 663 aaPredicted RBP9.9□□□□□ -0.82
NEDD9-201ENST00000379433 SSX3Q99909 188 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 PELOQ9BRX2 385 aaKnown RBP9.9□□□□□ -0.82
NEDD9-201ENST00000379433 CHRDQ9H2X0 955 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF229Q9UJW7 825 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 DSPPQ9NZW4 1301 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 OR6C70A6NIJ9 312 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 CD8B2A6NJW9 211 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 H7C1C5 153 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 SYT5O00445 386 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 DVL2O14641 736 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 PRAMEF2O60811 474 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 CBR3O75828 277 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 NCR1O76036 304 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 TIAF1O95411 115 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 CD8BP10966 210 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 GSTM3P21266 225 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 S1PR1P21453 382 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 PSMA1P25786 263 aaKnown RBP9.9□□□□□ -0.83
NEDD9-201ENST00000379433 PPP5CP53041 499 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 AP2S1P53680 142 aaPredicted RBP9.9□□□□□ -0.83
NEDD9-201ENST00000379433 CLDN6P56747 220 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 LCN6P62502 163 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 FAM199XQ6PEV8 388 aaPredicted RBP9.9□□□□□ -0.83
NEDD9-201ENST00000379433 RPTNQ6XPR3 784 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF620Q6ZNG0 422 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 CXXC5Q7LFL8 322 aaKnown RBP9.9□□□□□ -0.83
NEDD9-201ENST00000379433 SSX9Q7RTT3 188 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 ASCC1Q8N9N2 400 aaKnown RBP9.9□□□□□ -0.83
NEDD9-201ENST00000379433 SLC38A9Q8NBW4 561 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 OR4D10Q8NGI6 311 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 BORCS5Q969J3 196 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 ERMAPQ96PL5 475 aaPredicted RBP9.9□□□□□ -0.83
NEDD9-201ENST00000379433 MMP27Q9H306 513 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 GAREM1Q9H706 876 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 ERVK13-1Q9NX77 482 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 SERTAD3Q9UJW9 196 aa9.9□□□□□ -0.83
NEDD9-201ENST00000379433 ZFHX2Q9C0A1 2572 aaPredicted RBP9.89□□□□□ -0.83
NEDD9-201ENST00000379433 CDRT1O95170 752 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 F13BP05160 661 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 FBLP22087 321 aaKnown RBP9.89□□□□□ -0.83
NEDD9-201ENST00000379433 RPS27P42677 84 aaKnown RBP9.89□□□□□ -0.83
NEDD9-201ENST00000379433 STARD6P59095 220 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF829Q3KNS6 432 aaPredicted RBP9.89□□□□□ -0.83
NEDD9-201ENST00000379433 C12orf73Q69YU5 71 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 SLC36A4Q6YBV0 504 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 DMRTC2Q8IXT2 367 aaPredicted RBP9.89□□□□□ -0.83
NEDD9-201ENST00000379433 OR52E2Q8NGJ4 325 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 TMEM163Q8TC26 289 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 DYNC2LI1Q8TCX1 351 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 GTF3AQ92664 365 aaKnown RBP9.89□□□□□ -0.83
NEDD9-201ENST00000379433 OSTF1Q92882 214 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 ZMYND19Q96E35 227 aaPredicted RBP9.89□□□□□ -0.83
NEDD9-201ENST00000379433 VSTM2LQ96N03 204 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 PRSS27Q9BQR3 290 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 ASPNQ9BXN1 380 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 SLC26A1Q9H2B4 701 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 ISG20L2Q9H9L3 353 aaKnown RBP9.89□□□□□ -0.83
NEDD9-201ENST00000379433 PLSCR4Q9NRQ2 329 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 MLXQ9UH92 298 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 CFAP47Q6ZTR5 3102 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 TP53BP1Q12888 1972 aaPredicted RBP9.89□□□□□ -0.83
NEDD9-201ENST00000379433 A0A0U1RQK1 487 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF320A2RRD8 509 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 A6NIN4 97 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 B4E171 279 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 C11orf98E9PRG8 122 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 WRBO00258 174 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 ATXN7O15265 892 aaPredicted RBP9.89□□□□□ -0.83
NEDD9-201ENST00000379433 ZGLP1P0C6A0 271 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 EFNA3P52797 238 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 RPS25P62851 125 aaKnown RBP9.89□□□□□ -0.83
NEDD9-201ENST00000379433 CRMP1Q14194 572 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 PGGHGQ32M88 737 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 TCEAL6Q6IPX3 200 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 MTFR2Q6P444 385 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 APOOLQ6UXV4 268 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 CADM4Q8NFZ8 388 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 OR4C6Q8NH72 309 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 AKR7LQ8NHP1 331 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 TM9SF4Q92544 642 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 TCEAL3Q969E4 200 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms