RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TBCCD1Q9NVR7 557 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 KCND3Q9UK17 655 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 MGAMO43451 1857 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 OR6C70A6NIJ9 312 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 PRSS23O95084 383 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 WDPCPO95876 746 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 MT-ATP6P00846 226 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 ETV5P41161 510 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 EIF1P41567 113 aaKnown RBP13.3□□□□□ -0.28
TCOF1-202ENST00000377797 ETV1P50549 477 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 BIDP55957 195 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 OLFML2AQ68BL7 652 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 OR52N1Q8NH53 320 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 CDCA4Q9BXL8 241 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 OR11A1Q9GZK7 315 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 CHRNA9Q9UGM1 479 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 HHLA2Q9UM44 414 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 NOX1Q9Y5S8 564 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 M0R082 166 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 UPK1BO75841 260 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 GTF2F2P13984 249 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 RNF4P78317 190 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 SOWAHCQ53LP3 525 aaPredicted RBP13.3□□□□□ -0.28
TCOF1-202ENST00000377797 CCDC107Q8WV48 283 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF587Q96SQ5 575 aaPredicted RBP13.3□□□□□ -0.28
TCOF1-202ENST00000377797 WWTR1Q9GZV5 400 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 NLKQ9UBE8 527 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 ACAD8Q9UKU7 415 aa13.3□□□□□ -0.28
TCOF1-202ENST00000377797 MCTS1Q9ULC4 181 aaKnown RBP13.3□□□□□ -0.28
TCOF1-202ENST00000377797 ACOD1A6NK06 481 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 HIST1H1CP16403 213 aaKnown RBP13.29□□□□□ -0.28
TCOF1-202ENST00000377797 MPLP40238 635 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 LSSP48449 732 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 PUDPQ08623 228 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 CCNL2Q96S94 520 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-202ENST00000377797 SEMA4CQ9C0C4 833 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 MRPL15Q9P015 296 aaKnown RBP13.29□□□□□ -0.28
TCOF1-202ENST00000377797 PLEKHA6Q9Y2H5 1048 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 LOXL2Q9Y4K0 774 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 CKAP5Q14008 2032 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 LCATP04180 440 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 EVI2BP34910 448 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 HMGA2P52926 109 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 PM20D2Q8IYS1 436 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 HOXB13Q92826 284 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-202ENST00000377797 POLHQ9Y253 713 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 TMEM129A0AVI4 362 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 HPGDSO60760 199 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 OR2J2O76002 312 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 VAMP1P23763 118 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 NTRK2Q16620 822 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 TMEM244Q5VVB8 128 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 SLC25A24Q6NUK1 477 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 BAIAP2L2Q6UXY1 529 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 OR1N1Q8NGS0 311 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 URM1Q9BTM9 101 aaKnown RBP13.29□□□□□ -0.28
TCOF1-202ENST00000377797 PLA2G12AQ9BZM1 189 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 SMOC1Q9H4F8 434 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 SLC25A19Q9HC21 320 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 SLC7A11Q9UPY5 501 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF281Q9Y2X9 895 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF646O15015 1829 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-202ENST00000377797 ARHGAP9Q9BRR9 750 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 IER2Q9BTL4 223 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 CACNG6Q9BXT2 260 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 SCP2D1Q9UJQ7 156 aa13.29□□□□□ -0.28
TCOF1-202ENST00000377797 PTPN6P29350 595 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 POU3F4P49335 361 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 CLDN17P56750 224 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 PYHIN1Q6K0P9 492 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 SERPINA12Q8IW75 414 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 PHC2Q8IXK0 858 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 BRIX1Q8TDN6 353 aaKnown RBP13.28□□□□□ -0.28
TCOF1-202ENST00000377797 ASB17Q8WXJ9 295 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 V9GY05 133 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 NCR1O76036 304 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 GLCEO94923 617 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 CBX7O95931 251 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 LINC00271P0C7V0 271 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 CYB561P49447 251 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 SLC35A1P78382 337 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 H1FNTQ75WM6 255 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-202ENST00000377797 BBS1Q8NFJ9 593 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 OR5M1Q8NGP8 315 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 MYEF2Q9P2K5 600 aaKnown RBP13.28□□□□□ -0.28
TCOF1-202ENST00000377797 TRAV18A0A075B6X5 111 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 A8MV72 311 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-202ENST00000377797 DDAH2O95865 285 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 SHC1P29353 583 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 PITPNBP48739 271 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 ARPC4P59998 168 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 PRKCDQ05655 676 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 SMCO1Q147U7 214 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 CARFQ8N187 725 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 PARP16Q8N5Y8 322 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 ELP5Q8TE02 316 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 SPTSSAQ969W0 71 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 ZNF69Q9UC07 566 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 EXO1Q9UQ84 846 aaKnown RBP13.28□□□□□ -0.28
TCOF1-202ENST00000377797 SELENOFO60613 162 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms