RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 JRKO75564 520 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 SNRNP70P08621 437 aaKnown RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 ITGAMP11215 1152 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 C21orf33P30042 268 aaPredicted RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 MMP12P39900 470 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 ID4P47928 161 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 RPL34P49207 117 aaKnown RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 EIF2B1Q14232 305 aaKnown RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 TP53I3Q53FA7 332 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 METTL2BQ6P1Q9 378 aaKnown RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 NRARPQ7Z6K4 114 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 DUSP19Q8WTR2 217 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 GLYATL2Q8WU03 294 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 APH1AQ96BI3 265 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 RNF32Q9H0A6 362 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 CRISPLD2Q9H0B8 497 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 SPAARA0A1B0GVQ0 90 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 TSTD3H0UI37 97 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 CTDSP2O14595 271 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 SYT7O43581 403 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 AP1G1O43747 822 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 LCMT2O60294 686 aaKnown RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 STK17BO94768 372 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 IFNA4P05014 189 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 HIST1H1TP22492 207 aaPredicted RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 BDKRB2P30411 391 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 EIF1P41567 113 aaKnown RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 EMP3P54852 163 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 CLDN17P56750 224 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 C17orf67Q0P5P2 114 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 SLX4IPQ5VYV7 408 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 PLCXD3Q63HM9 321 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 TMEM150AQ86TG1 271 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 RETREG3Q86VR2 466 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 OR5H2Q8NGV7 314 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 FAM71F1Q96KD3 344 aaPredicted RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 SAMD8Q96LT4 415 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 MBNL1Q9NR56 388 aaKnown RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 DCAF13Q9NV06 445 aaKnown RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 CNIH4Q9P003 139 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 UBE2J1Q9Y385 318 aaPredicted RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 ASB1Q9Y576 335 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 KNTC1P50748 2209 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 BRWD1Q9NSI6 2320 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 ICMTO60725 284 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 SNAPINO95295 136 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 KNG1P01042 644 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 HTR5AP47898 357 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 SMAD2Q15796 467 aaKnown RBP10.02□□□□□ -0.81
HIF3A-205ENST00000377670 SBSNQ6UWP8 590 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 CHCHD4Q8N4Q1 142 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 MALSU1Q96EH3 234 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 SLC41A3Q96GZ6 507 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 SLC25A18Q9H1K4 315 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 OPA3Q9H6K4 179 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 SLC7A7Q9UM01 511 aa10.02□□□□□ -0.81
HIF3A-205ENST00000377670 IMPA1P29218 277 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 TGM4P49221 684 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 METAP1P53582 386 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 SELENOWP63302 87 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 PIN1Q13526 163 aaPredicted RBP10.01□□□□□ -0.81
HIF3A-205ENST00000377670 SSX2Q16385 188 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 TRIM46Q7Z4K8 759 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 OR51L1Q8NGJ5 315 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 MUL1Q969V5 352 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 BTBD2Q9BX70 525 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 INIPQ9NRY2 104 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 OR6C6A6NF89 314 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 PPP1R3DO95685 299 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 PRSS3P35030 304 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 SCGB2A2Q13296 93 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 LIN37Q96GY3 246 aaPredicted RBP10.01□□□□□ -0.81
HIF3A-205ENST00000377670 SGCZQ96LD1 299 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 IL21Q9HBE4 155 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 FGF22Q9HCT0 170 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 TRIOBPQ9H2D6 2365 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 NUDT21O43809 227 aaKnown RBP10.01□□□□□ -0.81
HIF3A-205ENST00000377670 NCR1O76036 304 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 LIPCP11150 499 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 CDK2P24941 298 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 CHATP28329 748 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 TRA2BP62995 288 aaKnown RBP10.01□□□□□ -0.81
HIF3A-205ENST00000377670 NKX3-2P78367 333 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 HTR4Q13639 388 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 TBC1D28Q2M2D7 210 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 FAM69AQ5T7M9 428 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 AWAT2Q6E213 333 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 FAM122CQ6P4D5 195 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 SCCPDHQ8NBX0 429 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 SYNPRQ8TBG9 265 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 FRZBQ92765 325 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 RPL3LQ92901 407 aaKnown RBP10.01□□□□□ -0.81
HIF3A-205ENST00000377670 TEX37Q96LM6 180 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 NUDT22Q9BRQ3 303 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 TCEAL7Q9BRU2 100 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 NTMT1Q9BV86 223 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 NTN4Q9HB63 628 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 HAO2Q9NYQ3 351 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 IGHV3-20A0A0C4DH32 117 aa10.01□□□□□ -0.81
HIF3A-205ENST00000377670 NAP1L6A6NFF2 107 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms