RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 DNAJC22Q8N4W6 341 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 BRIX1Q8TDN6 353 aaKnown RBP12.59□□□□□ -0.39
GPC6-201ENST00000377047 BORCS7Q96B45 105 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 C8orf44Q96CB5 159 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 ACKR4Q9NPB9 350 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 TMEM100Q9NV29 134 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 STEAP1Q9UHE8 339 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 NKX6-3A6NJ46 265 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 GPR171O14626 319 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 VEGFCP49767 419 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 RPL23AP62750 156 aaKnown RBP12.59□□□□□ -0.39
GPC6-201ENST00000377047 OR2G6Q5TZ20 316 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 OR13C9Q8NGT0 318 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 TMIGD2Q96BF3 282 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 TSNAXQ99598 290 aaKnown RBP12.59□□□□□ -0.39
GPC6-201ENST00000377047 P2RY12Q9H244 342 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 ENPP5Q9UJA9 477 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 PTGER4P35408 488 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 ZNF136P52737 540 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 SLC15A4Q8N697 577 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 ZFAND1Q8TCF1 268 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 CCDC74BQ96LY2 380 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 WDR76Q9H967 626 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 GNG12Q9UBI6 72 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 A0A1W2PPC4 97 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 TCRBV5S1A1TA0A578 114 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 A8MVM7 634 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 AKR7A3O95154 331 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 TK1P04183 234 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 MAKP20794 623 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 CXADRP78310 365 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 GABREP78334 506 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 METTL11BQ5VVY1 283 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 GLB1L2Q8IW92 636 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 SPARTQ8N0X7 666 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 OR5D18Q8NGL1 313 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 SDHAF2Q9NX18 166 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 NPFFR2Q9Y5X5 522 aa12.58□□□□□ -0.39
GPC6-201ENST00000377047 NAP1L6A6NFF2 107 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 PIP5K1CO60331 668 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 NXPH2O95156 264 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 PTAFRP25105 342 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 TRHRP34981 398 aaPredicted RBP12.58□□□□□ -0.4
GPC6-201ENST00000377047 Q6ZSR9 355 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 SLC16A11Q8NCK7 471 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 DMBX1Q8NFW5 382 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 MS4A6EQ96DS6 147 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 BCL7BQ9BQE9 202 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 MKRN2Q9H000 416 aaKnown RBP12.58□□□□□ -0.4
GPC6-201ENST00000377047 LTB4R2Q9NPC1 389 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 LRFN1Q9P244 771 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 NUBP2Q9Y5Y2 271 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 MYO10Q9HD67 2058 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 IDSB3KWA1 339 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 C1orf140Q5VVS0 124 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 FAM71E1Q6IPT2 247 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 PPIL3Q9H2H8 161 aaKnown RBP12.58□□□□□ -0.4
GPC6-201ENST00000377047 MYOTQ9UBF9 498 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 CORINQ9Y5Q5 1042 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 TMEM212A6NML5 194 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 GABRPO00591 440 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 TFP02787 698 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 MT-ND4P03905 459 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 C21orf33P30042 268 aaPredicted RBP12.58□□□□□ -0.4
GPC6-201ENST00000377047 ZNF91Q05481 1191 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 PM20D2Q8IYS1 436 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 TAAR8Q969N4 342 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 PRR14Q9BWN1 585 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 WBP1LQ9NX94 342 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 PAQR5Q9NXK6 330 aaPredicted RBP12.58□□□□□ -0.4
GPC6-201ENST00000377047 OR51B4Q9Y5P0 310 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 P2RY10O00398 339 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 RRAS2P62070 204 aaPredicted RBP12.58□□□□□ -0.4
GPC6-201ENST00000377047 UBE2NLQ5JXB2 153 aa12.58□□□□□ -0.4
GPC6-201ENST00000377047 CCDC163A0A0D9SF12 145 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 ACOD1A6NK06 481 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 TOR1AO14656 332 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 LILRB5O75023 590 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 BDKRB2P30411 391 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 DPY19L2P2Q6ZN68 376 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 MIB2Q96AX9 1013 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 HEXAP06865 529 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 EPHA5P54756 1037 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 MLLT11Q13015 90 aaPredicted RBP12.57□□□□□ -0.4
GPC6-201ENST00000377047 PRICKLE2Q7Z3G6 844 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 CMIPQ8IY22 773 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 TRIB1Q96RU8 372 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 HIPK2Q9H2X6 1198 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 hCG_1809904A0A1W2PP81 198 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 A0A1W2PPE2 198 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 A0A1W2PR64 198 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 A0A1W2PRV1 198 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 FUOMA2VDF0 154 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 H3BMQ9 156 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 TUSC2O75896 110 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 MYF5P13349 255 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 SLC19A1P41440 591 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 IL13RA1P78552 427 aa12.57□□□□□ -0.4
GPC6-201ENST00000377047 MRPS10P82664 201 aaKnown RBP12.57□□□□□ -0.4
GPC6-201ENST00000377047 TRMT12Q53H54 448 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms