RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 NPIPB7O75200 414 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 AKR7A3O95154 331 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 AGR2O95994 175 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 IGFBP1P08833 259 aaPredicted RBP8.3□□□□□ -1.08
C9orf85-202ENST00000377027 MYZAPP0CAP1 466 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 HOXB9P17482 250 aaPredicted RBP8.3□□□□□ -1.08
C9orf85-202ENST00000377027 LBPP18428 481 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 CHI3L1P36222 383 aaPredicted RBP8.3□□□□□ -1.08
C9orf85-202ENST00000377027 SLC1A3P43003 542 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 CLK1P49759 484 aaKnown RBP8.3□□□□□ -1.08
C9orf85-202ENST00000377027 FABP6P51161 128 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 SRSF2Q01130 221 aaKnown RBP8.3□□□□□ -1.08
C9orf85-202ENST00000377027 CEACAM7Q14002 265 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 DPY19L1Q2PZI1 675 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 KRT71Q3SY84 523 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 ATAD3BQ5T9A4 648 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 ANXA8L1Q5VT79 327 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 PAQR6Q6TCH4 344 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 COMTD1Q86VU5 262 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 WDFY1Q8IWB7 410 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 LRRC34Q8IZ02 419 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 CLIP4Q8N3C7 705 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 C1orf162Q8NEQ5 155 aaPredicted RBP8.3□□□□□ -1.08
C9orf85-202ENST00000377027 ABHD4Q8TB40 342 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 WDR60Q8WVS4 1066 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 VPS33AQ96AX1 596 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 AURKBQ96GD4 344 aaPredicted RBP8.3□□□□□ -1.08
C9orf85-202ENST00000377027 BOD1Q96IK1 185 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 RADILQ96JH8 1075 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 SORCS2Q96PQ0 1159 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 RHNO1Q9BSD3 238 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 SOX7Q9BT81 388 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 FAIMQ9NVQ4 179 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 SEC14L4Q9UDX3 406 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 PCDHGB4Q9UN71 923 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 MGAT4BQ9UQ53 548 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 SLC9A8Q9Y2E8 581 aa8.3□□□□□ -1.08
C9orf85-202ENST00000377027 SPIN1Q9Y657 262 aaPredicted RBP8.3□□□□□ -1.08
C9orf85-202ENST00000377027 AQP7P3A6NL99 342 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 RNF212BA8MTL3 300 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 FTCDNL1E5RQL4 147 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 KLF11O14901 512 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 PHF1O43189 567 aaPredicted RBP8.29□□□□□ -1.08
C9orf85-202ENST00000377027 FZD7O75084 574 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 SNNO75324 88 aaPredicted RBP8.29□□□□□ -1.08
C9orf85-202ENST00000377027 ETFAP13804 333 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 IGFBP5P24593 272 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 EPHA3P29320 983 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 MPGP29372 298 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 S100A3P33764 101 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 MAGEA8P43361 318 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 SELENOPP49908 381 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 CLNS1AP54105 237 aaKnown RBP8.29□□□□□ -1.08
C9orf85-202ENST00000377027 SLC35A1P78382 337 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 EGR4Q05215 589 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 OR7A5Q15622 319 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 KRTAP24-1Q3LI83 254 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 OTUD3Q5T2D3 398 aaPredicted RBP8.29□□□□□ -1.08
C9orf85-202ENST00000377027 OR7E24Q6IFN5 339 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 ZNF544Q6NX49 715 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 CLEC2AQ6UVW9 174 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 IL17RELQ6ZVW7 336 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 EPHX4Q8IUS5 362 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 CMIPQ8IY22 773 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 FBXL14Q8N1E6 418 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 C10orf111Q8N326 155 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 C17orf78Q8N4C9 275 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 ANKS4BQ8N8V4 417 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 OR9K2Q8NGE7 335 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 ARL8AQ96BM9 186 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 ZHX1-C8orf76Q96EF9 292 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 ALKBH3Q96Q83 286 aaPredicted RBP8.29□□□□□ -1.08
C9orf85-202ENST00000377027 PANX1Q96RD7 426 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 PTDSS2Q9BVG9 487 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 KRTAP4-8Q9BYQ9 185 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 POU2F3Q9UKI9 436 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 MOKQ9UQ07 419 aa8.29□□□□□ -1.08
C9orf85-202ENST00000377027 CFAP73A6NFT4 308 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 NR5A2O00482 541 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 TM9SF1O15321 606 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 EIF1BO60739 113 aaKnown RBP8.28□□□□□ -1.08
C9orf85-202ENST00000377027 UPK3AO75631 287 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 LGI1O95970 557 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 CELA3BP08861 270 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 TFPTP0C1Z6 253 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 FAM157CP0CG43 387 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 SLC25A16P16260 332 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 CALCRP30988 508 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 APOBEC3AP31941 199 aaPredicted RBP8.28□□□□□ -1.08
C9orf85-202ENST00000377027 HTR3AP46098 478 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 TUBA1BP68363 451 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 TUBA4AP68366 448 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 HPCAP84074 193 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 HOXC5Q00444 222 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 STX3Q13277 289 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 TBRG1Q3YBR2 411 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 CHRFAM7AQ494W8 412 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 SLC9B1Q4ZJI4 515 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 PODNL1Q6PEZ8 512 aa8.28□□□□□ -1.08
C9orf85-202ENST00000377027 KLHL17Q6TDP4 642 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms