RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 STK35Q8TDR2 534 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 VPS33AQ96AX1 596 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 KCNS3Q9BQ31 491 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 SPATA9Q9BWV2 254 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 RSPO3Q9BXY4 272 aaPredicted RBP12.97□□□□□ -0.33
CLCN6-204ENST00000376491 BPESC1Q9GZL8 116 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 CENPHQ9H3R5 247 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 B3GAT1Q9P2W7 334 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 SEC14L4Q9UDX3 406 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 RASD1Q9Y272 281 aa12.97□□□□□ -0.33
CLCN6-204ENST00000376491 A0A096LPI6 279 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 ZNF503-AS2A6NEH8 195 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 TRPC5OSA6NMA1 111 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 SLC22A3O75751 556 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 AHSA1O95433 338 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 IGKV3-15P01624 115 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 NUDT7P0C024 238 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 SRD5A1P18405 259 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 NCF2P19878 526 aaPredicted RBP12.96□□□□□ -0.33
CLCN6-204ENST00000376491 PAX7P23759 505 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 RPS5P46782 204 aaKnown RBP12.96□□□□□ -0.33
CLCN6-204ENST00000376491 CLDN17P56750 224 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 ROR2Q01974 943 aaKnown RBP12.96□□□□□ -0.33
CLCN6-204ENST00000376491 ATG16L1Q676U5 607 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 SLC25A36Q96CQ1 311 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 ZNF837Q96EG3 531 aaPredicted RBP12.96□□□□□ -0.33
CLCN6-204ENST00000376491 KTI12Q96EK9 354 aaPredicted RBP12.96□□□□□ -0.33
CLCN6-204ENST00000376491 MAELQ96JY0 434 aaKnown RBP12.96□□□□□ -0.33
CLCN6-204ENST00000376491 ZNF317Q96PQ6 595 aaPredicted RBP12.96□□□□□ -0.33
CLCN6-204ENST00000376491 PARD6BQ9BYG5 372 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 MYOZ1Q9NP98 299 aaPredicted RBP12.96□□□□□ -0.33
CLCN6-204ENST00000376491 THAP1Q9NVV9 213 aa12.96□□□□□ -0.33
CLCN6-204ENST00000376491 A0A0G2JPF8 293 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 TMEM129A0AVI4 362 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 OR6C65A6NJZ3 312 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 HNRNPCL2B2RXH8 293 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 HNRNPCL3B7ZW38 293 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 RPL36A-HNRNPH2H7BZ11 118 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 HNRNPCL1O60812 293 aaKnown RBP12.95□□□□□ -0.34
CLCN6-204ENST00000376491 FZD7O75084 574 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 ANP32DO95626 131 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 IGFBP1P08833 259 aaPredicted RBP12.95□□□□□ -0.34
CLCN6-204ENST00000376491 HNRNPCL4P0DMR1 293 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 HOXB1P14653 301 aaPredicted RBP12.95□□□□□ -0.34
CLCN6-204ENST00000376491 IDO1P14902 403 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 ZNF23P17027 643 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 PPOXP50336 477 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 ARF1P84077 181 aaKnown RBP12.95□□□□□ -0.34
CLCN6-204ENST00000376491 ZSWIM7Q19AV6 140 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 IQCCQ4KMZ1 466 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 SLC9B1Q4ZJI4 515 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 HHATQ5VTY9 493 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 NXNQ6DKJ4 435 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 MAVSQ7Z434 540 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 ZCCHC24Q8N2G6 241 aaKnown RBP12.95□□□□□ -0.34
CLCN6-204ENST00000376491 FAM169BQ8N8A8 192 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 NUP37Q8NFH4 326 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 OR9I1Q8NGQ6 314 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 DOK1Q99704 481 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 C19orf24Q9BVV8 132 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 ZNF232Q9UNY5 417 aa12.95□□□□□ -0.34
CLCN6-204ENST00000376491 LRP5LA4QPB2 252 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 STAMBPO95630 424 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 TGFAP01135 160 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 CBR1P16152 277 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 ZNF43P17038 809 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 THBS4P35443 961 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 IDH3GP51553 393 aaPredicted RBP12.94□□□□□ -0.34
CLCN6-204ENST00000376491 SH3BGRP55822 239 aaPredicted RBP12.94□□□□□ -0.34
CLCN6-204ENST00000376491 RGNQ15493 299 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 ZNF311Q5JNZ3 666 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 C6orf89Q6UWU4 347 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 OR4F15Q8NGB8 312 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 MAL2Q969L2 176 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 ITCHQ96J02 903 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 OXGR1Q96P68 337 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 RAB1BQ9H0U4 201 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 ZNF442Q9H7R0 627 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 GPR35Q9HC97 309 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 BCL2L10Q9HD36 194 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 SDR39U1Q9NRG7 319 aaPredicted RBP12.94□□□□□ -0.34
CLCN6-204ENST00000376491 ZIM2Q9NZV7 527 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 RCE1Q9Y256 329 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 IFT52Q9Y366 437 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 PCDHB14Q9Y5E9 798 aa12.94□□□□□ -0.34
CLCN6-204ENST00000376491 IGKV1D-42A0A075B6H8 117 aa12.93□□□□□ -0.34
CLCN6-204ENST00000376491 IGHV2OR16-5A0A0B4J2B6 119 aa12.93□□□□□ -0.34
CLCN6-204ENST00000376491 TMEM120BA0PK00 339 aa12.93□□□□□ -0.34
CLCN6-204ENST00000376491 hCG_2039718K7EN88 272 aa12.93□□□□□ -0.34
CLCN6-204ENST00000376491 HOXB9P17482 250 aaPredicted RBP12.93□□□□□ -0.34
CLCN6-204ENST00000376491 IL2RGP31785 369 aa12.93□□□□□ -0.34
CLCN6-204ENST00000376491 POLR2JP52435 117 aaKnown RBP12.93□□□□□ -0.34
CLCN6-204ENST00000376491 CEACAM16Q2WEN9 425 aa12.93□□□□□ -0.34
CLCN6-204ENST00000376491 PHYHD1Q5SRE7 291 aa12.93□□□□□ -0.34
CLCN6-204ENST00000376491 C6orf10Q5SRN2 563 aa12.93□□□□□ -0.34
CLCN6-204ENST00000376491 MSANTD1Q6ZTZ1 278 aa12.93□□□□□ -0.34
CLCN6-204ENST00000376491 COMTD1Q86VU5 262 aa12.93□□□□□ -0.34
CLCN6-204ENST00000376491 SVOPLQ8N434 492 aa12.93□□□□□ -0.34
CLCN6-204ENST00000376491 ANKK1Q8NFD2 765 aa12.93□□□□□ -0.34
CLCN6-204ENST00000376491 GTF2H4Q92759 462 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms