RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 NIPAL3Q6P499 406 aa12.53□□□□□ -0.4
CLCN6-203ENST00000376490 ZNF613Q6PF04 617 aa12.53□□□□□ -0.4
CLCN6-203ENST00000376490 H1FNTQ75WM6 255 aaPredicted RBP12.53□□□□□ -0.4
CLCN6-203ENST00000376490 TSPYL5Q86VY4 417 aaPredicted RBP12.53□□□□□ -0.4
CLCN6-203ENST00000376490 WDR31Q8NA23 367 aa12.53□□□□□ -0.4
CLCN6-203ENST00000376490 POMGNT2Q8NAT1 580 aa12.53□□□□□ -0.4
CLCN6-203ENST00000376490 WFDC11Q8NEX6 87 aa12.53□□□□□ -0.4
CLCN6-203ENST00000376490 MOGAT1Q96PD6 335 aa12.53□□□□□ -0.4
CLCN6-203ENST00000376490 TMUB1Q9BVT8 246 aa12.53□□□□□ -0.4
CLCN6-203ENST00000376490 GMPR2Q9P2T1 348 aaKnown RBP12.53□□□□□ -0.4
CLCN6-203ENST00000376490 B3GAT1Q9P2W7 334 aa12.53□□□□□ -0.4
CLCN6-203ENST00000376490 SLC25A15Q9Y619 301 aa12.53□□□□□ -0.4
CLCN6-203ENST00000376490 ACANP16112 2415 aa12.52□□□□□ -0.4
CLCN6-203ENST00000376490 FZD7O75084 574 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 UPK3AO75631 287 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 KRT33AO76009 404 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 LYPD3O95274 346 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 HPRP00739 348 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 ZNF43P17038 809 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 TNFRSF1BP20333 461 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 MPGP29372 298 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 ZNF83P51522 516 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 GYS2P54840 703 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 FOXD4Q12950 439 aaPredicted RBP12.52□□□□□ -0.41
CLCN6-203ENST00000376490 SWT1Q5T5J6 900 aaKnown RBP12.52□□□□□ -0.41
CLCN6-203ENST00000376490 ADAM5Q6NVV9 412 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 ERICH5Q6P6B1 374 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 WDR88Q6ZMY6 472 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 LINGO2Q7L985 606 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 SPATA21Q7Z572 469 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 TREML1Q86YW5 311 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 KRTAP1-3Q8IUG1 177 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 C10orf53Q8N6V4 93 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 ZNF611Q8N823 705 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 KBTBD8Q8NFY9 601 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 ADAMTS16Q8TE57 1224 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 RASSF5Q8WWW0 418 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 IGFBPL1Q8WX77 278 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 EPYCQ99645 322 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 TMEM43Q9BTV4 400 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 AMBRA1Q9C0C7 1298 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 SLC17A5Q9NRA2 495 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 CMTM6Q9NX76 183 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 SLC7A7Q9UM01 511 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 B3GALT5Q9Y2C3 310 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 SH3GLB1Q9Y371 365 aa12.52□□□□□ -0.41
CLCN6-203ENST00000376490 PLCE1Q9P212 2302 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 TRAPPC13A5PLN9 417 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 CHP2O43745 196 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 SHOX2O60902 331 aaPredicted RBP12.51□□□□□ -0.41
CLCN6-203ENST00000376490 ZNF432O94892 652 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 HLA-DOBP13765 273 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 KDELR2P33947 212 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 IL1RL1Q01638 556 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 TGFBR3Q03167 851 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 C1DQ13901 141 aaKnown RBP12.51□□□□□ -0.41
CLCN6-203ENST00000376490 SSX8Q7RTT4 187 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 CARM1Q86X55 608 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 SLC15A3Q8IY34 581 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 OR2T12Q8NG77 320 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 OR6S1Q8NH40 331 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 PROX1Q92786 737 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 PERPQ96FX8 193 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 SLC41A3Q96GZ6 507 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 ASPNQ9BXN1 380 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 FAM107BQ9H098 131 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 LAMP3Q9UQV4 416 aa12.51□□□□□ -0.41
CLCN6-203ENST00000376490 LOC102725191A0A1B0GVB3 256 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 ELOVL7A1L3X0 281 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 FAM220BPB1ANY3 271 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 SHISA9B4DS77 424 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 M0R1B8 84 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 ABCD4O14678 606 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 NQO1P15559 274 aaKnown RBP12.5□□□□□ -0.41
CLCN6-203ENST00000376490 DRD4P21917 467 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 OR1E2P47887 323 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 SLC25A3Q00325 362 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 PMS2P3Q13401 168 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 MFSD13AQ14CX5 517 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 ZNF672Q499Z4 452 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-203ENST00000376490 HIKESHIQ53FT3 197 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 CYBRD1Q53TN4 286 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 TTC33Q6PID6 262 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-203ENST00000376490 NHLRC1Q6VVB1 395 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 ABHD12BQ7Z5M8 362 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-203ENST00000376490 MICU2Q8IYU8 434 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 LRRC75A-AS1Q8N1F1 130 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 C1orf162Q8NEQ5 155 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-203ENST00000376490 TMEM171Q8WVE6 324 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 FBXW5Q969U6 566 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 TXNDC15Q96J42 360 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 ALKBH3Q96Q83 286 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-203ENST00000376490 PRSS27Q9BQR3 290 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 LINC00470Q9BZP3 86 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 PCDHAC1Q9H158 963 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 EFCAB1Q9HAE3 211 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 CISD1Q9NZ45 108 aaKnown RBP12.5□□□□□ -0.41
CLCN6-203ENST00000376490 BAG5Q9UL15 447 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 CORINQ9Y5Q5 1042 aa12.5□□□□□ -0.41
CLCN6-203ENST00000376490 GMNCA6NCL1 334 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms