RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 PAHP00439 452 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 MT-ND4P03905 459 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 THBS1P07996 1170 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 ARHGAP11BQ3KRB8 267 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 SYT14P1Q58G82 188 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 DHRS4L2Q6PKH6 230 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 ELMOD3Q96FG2 381 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 HCAR1Q9BXC0 346 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 FOXQ1Q9C009 403 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 WDR76Q9H967 626 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 EMC3Q9P0I2 261 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 YKT6O15498 198 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 ADH6P28332 368 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 BIDP55957 195 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 C9orf135Q5VTT2 229 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 UBE2UQ5VVX9 321 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 METAP1DQ6UB28 335 aaPredicted RBP12.57□□□□□ -0.4
C9orf47-203ENST00000375851 FAM57BQ71RH2 274 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 DNAJC5GQ8N7S2 189 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 RCBTB1Q8NDN9 531 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 IL17RDQ8NFM7 739 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 OR13C9Q8NGT0 318 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 PFN4Q8NHR9 129 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 SNAPC3Q92966 411 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 LRRC46Q96FV0 321 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 ZC3H10Q96K80 434 aaKnown RBP12.57□□□□□ -0.4
C9orf47-203ENST00000375851 OR51B6Q9H340 312 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 ZNF226Q9NYT6 803 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 ZNF225Q9UK10 706 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 C2orf72A6NCS6 295 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 NSA2O95478 260 aaKnown RBP12.57□□□□□ -0.4
C9orf47-203ENST00000375851 CNOT4O95628 575 aaKnown RBP12.57□□□□□ -0.4
C9orf47-203ENST00000375851 TP53P04637 393 aaPredicted RBP12.57□□□□□ -0.4
C9orf47-203ENST00000375851 DBHP09172 617 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 APEX1P27695 318 aaKnown RBP12.57□□□□□ -0.4
C9orf47-203ENST00000375851 MCCD1P59942 119 aaPredicted RBP12.57□□□□□ -0.4
C9orf47-203ENST00000375851 PCBD1P61457 104 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 CYCSP99999 105 aaKnown RBP12.57□□□□□ -0.4
C9orf47-203ENST00000375851 STK11Q15831 433 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 TATDN3Q17R31 274 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 TSSK4Q6SA08 328 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 COX15Q7KZN9 410 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 OR52N1Q8NH53 320 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 CD300LFQ8TDQ1 290 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 RASD2Q96D21 266 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 MBOAT4Q96T53 435 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 DVL2O14641 736 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 IFNA5P01569 189 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 IGFBP1P08833 259 aaPredicted RBP12.57□□□□□ -0.4
C9orf47-203ENST00000375851 HTR2BP41595 481 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 CTU2Q2VPK5 515 aaKnown RBP12.57□□□□□ -0.4
C9orf47-203ENST00000375851 Q499Y3 187 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 AAED1Q7RTV5 226 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 BEST4Q8NFU0 473 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 SLC2A12Q8TD20 617 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 LTB4R2Q9NPC1 389 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 TTLL8A6PVC2 850 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 PTGS2P35354 604 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 FAM219BQ5XKK7 198 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 ACSM5Q6NUN0 579 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 NOXA1Q86UR1 476 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 NRIP3Q9NQ35 241 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 PPIL1Q9Y3C6 166 aa12.57□□□□□ -0.4
C9orf47-203ENST00000375851 IGLV3-16A0A075B6K0 115 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 PPM1DO15297 605 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 IGHEP01854 428 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 CD46P15529 392 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 CD22P20273 847 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 PRPH2P23942 346 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 GABRR1P24046 479 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 SLC35A1P78382 337 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 CNN3Q15417 329 aaKnown RBP12.56□□□□□ -0.4
C9orf47-203ENST00000375851 MEP1BQ16820 701 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 SFXN4Q6P4A7 337 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 SLC16A14Q7RTX9 510 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 CD163Q86VB7 1156 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 LRRC18Q8N456 261 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 GIMAP5Q96F15 307 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 PRRT1Q99946 306 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 NOX3Q9HBY0 568 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 SLC17A4Q9Y2C5 497 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 ANKRD30BLA7E2S9 258 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 CLEC2LP0C7M8 214 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 SMAD4Q13485 552 aaKnown RBP12.56□□□□□ -0.4
C9orf47-203ENST00000375851 MLC1Q15049 377 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 VWA2Q5GFL6 755 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 TMEM53Q6P2H8 277 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 FAM198BQ6UWH4 519 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 SGPP2Q8IWX5 399 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 ACBD4Q8NC06 268 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 CHPT1Q8WUD6 406 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 CNRIP1Q96F85 164 aaPredicted RBP12.56□□□□□ -0.4
C9orf47-203ENST00000375851 OR14A2Q96R54 314 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 BCL2L10Q9HD36 194 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 NTNG1Q9Y2I2 539 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 PIGBOS1A0A0B4J2F0 54 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 F5H5P2 479 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 SLC43A1O75387 559 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 C1QAP02745 245 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms