RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 TAS2R8Q9NYW2 309 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 FADS1O60427 444 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 SOD1P00441 154 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 SLC26A5P58743 744 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 EIF5AP63241 154 aaKnown RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 NLRC3Q7RTR2 1065 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM151BQ8IW70 566 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 HIST1H2AAQ96QV6 131 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 SDHAF2Q9NX18 166 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 RABL2AQ9UBK7 228 aaPredicted RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 STEAP1Q9UHE8 339 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 A4GNTQ9UNA3 340 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 POLHQ9Y253 713 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 H7C417 338 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 SNAPC5O75971 98 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 UBL3O95164 117 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF28P17035 718 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 GNRHRP30968 328 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 OR1D4P47884 311 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 KIR2DS3Q14952 304 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 RBMS2Q15434 407 aaKnown RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF620Q6ZNG0 422 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 CMTM4Q8IZR5 234 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 HOXB13Q92826 284 aaPredicted RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF649Q9BS31 505 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 A3GALT2U3KPV4 340 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 C17orf113A0A1B0GUU1 675 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 C2orf72A6NCS6 295 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 EGFP01133 1207 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 TP53P04637 393 aaPredicted RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 RAB6AP20340 208 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 IL13RA1P78552 427 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF546Q86UE3 836 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 SFTPA1Q8IWL2 248 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 RDH10Q8IZV5 341 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 ZFP82Q8N141 532 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 C12orf45Q8N5I9 185 aaPredicted RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 OR4Q3Q8NH05 313 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 MFSD8Q8NHS3 518 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 ZBTB8AQ96BR9 441 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 TBC1D20Q96BZ9 403 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 GIMAP5Q96F15 307 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 MED30Q96HR3 178 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 SNX18Q96RF0 628 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 SGPP1Q9BX95 441 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 ADAM18Q9Y3Q7 739 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 CCDC88CQ9P219 2028 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 IL33O95760 270 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 HNRNPA2B1P22626 353 aaKnown RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 PXNP49023 591 aaPredicted RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 SRYQ05066 204 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM52BQ4KMG9 183 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 TCTN3Q6NUS6 607 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 OR5M1Q8NGP8 315 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 SLC41A2Q96JW4 573 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 ARHGAP9Q9BRR9 750 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 PTDSS2Q9BVG9 487 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 CNOT4O95628 575 aaKnown RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 EEF1A2Q05639 463 aaKnown RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 KIAA0040Q15053 153 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 PRAMEF8Q5VWM4 474 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 PRAMEF7Q5VXH5 474 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 KANSL1Q7Z3B3 1105 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 ZBTB44Q8NCP5 570 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 LRRC46Q96FV0 321 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 RABL2BQ9UNT1 228 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 F5H5K5 113 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 FCMRO60667 390 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 GJA4P35212 333 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 RAB38P57729 211 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 RHEBQ15382 184 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 SLAMF9Q96A28 289 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 CGGBP1Q9UFW8 167 aaPredicted RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 GMEB2Q9UKD1 530 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 A0A0A6YYD5 115 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 P2RY10O00398 339 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 MAN2B1O00754 1011 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 GPR75O95800 540 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 TRHRP34981 398 aaPredicted RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 KCNAB1Q14722 419 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 C12orf73Q69YU5 71 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 ARSKQ6UWY0 536 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 FAM57BQ71RH2 274 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 MED25Q71SY5 747 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 COX15Q7KZN9 410 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 MARCH3Q86UD3 253 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 LRRC56Q8IYG6 542 aaPredicted RBP6.04□□□□□ -1.44
SMC1A-202ENST00000375340 OR51S1Q8NGJ8 323 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM234Q8WY98 164 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 TOMM40LQ969M1 308 aa6.04□□□□□ -1.44
SMC1A-202ENST00000375340 ARRDC5A6NEK1 342 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 CHP2O43745 196 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 UTS2O95399 124 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 GABRB1P18505 474 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 TACR3P29371 465 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 ALKBH1Q13686 389 aaKnown RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 METRNLQ641Q3 311 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM184AQ6ZMB5 413 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 OR5T1Q8NG75 326 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms