RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 TMEM52BQ4KMG9 183 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 UBE2NLQ5JXB2 153 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 PLEKHS1Q5SXH7 462 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 LRRTM4Q86VH4 590 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 RNF113BQ8IZP6 322 aaKnown RBP11.18□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF740Q8NDX6 193 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 OR5D16Q8NGK9 328 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 GPA33Q99795 319 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 EDEM2Q9BV94 578 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 ALG8Q9BVK2 526 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 GPR174Q9BXC1 333 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 TMEM185BQ9H7F4 350 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 TAS2R10Q9NYW0 307 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 A4GNTQ9UNA3 340 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 SLCO1B1Q9Y6L6 691 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 NINQ8N4C6 2090 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 PIP5K1CO60331 668 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 PRKRAO75569 313 aaKnown RBP11.18□□□□□ -0.62
C9orf3-203ENST00000375315 CD63P08962 238 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 GABRG2P18507 467 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 IGFALSP35858 605 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 IFNGR2P38484 337 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 RPS21P63220 83 aaKnown RBP11.18□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF763Q0D2J5 394 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 C1orf61Q13536 156 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 CLEC12AQ5QGZ9 265 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 THOC6Q86W42 341 aaKnown RBP11.18□□□□□ -0.62
C9orf3-203ENST00000375315 NRSN1Q8IZ57 195 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 STK35Q8TDR2 534 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 TMEM19Q96HH6 336 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF607Q96SK3 696 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 TLNRD1Q9H1K6 362 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 OR51I1Q9H343 314 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 SGK2Q9HBY8 427 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 TMEM138Q9NPI0 162 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 ACSS1Q9NUB1 689 aaPredicted RBP11.18□□□□□ -0.62
C9orf3-203ENST00000375315 SH2B3Q9UQQ2 575 aa11.18□□□□□ -0.62
C9orf3-203ENST00000375315 SLC5A10A0PJK1 596 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 OR2W5A6NFC9 320 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 GPR37O15354 613 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 FLRT2O43155 660 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF749O43361 778 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 FMO6PO60774 539 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 ABCD3P28288 659 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 RAB2AP61019 212 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 PRR5P85299 388 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 FAM180BQ6P0A1 224 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF561Q8N587 486 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 OR4D11Q8NGI4 311 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 OR51G2Q8NGK0 314 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 SLC38A5Q8WUX1 472 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF480Q8WV37 535 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 WNT2BQ93097 391 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 RAB7BQ96AH8 199 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 CMTM3Q96MX0 182 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF471Q9BX82 626 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-203ENST00000375315 SEC11CQ9BY50 192 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 FAM117AQ9C073 453 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 KLHL31Q9H511 634 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 C6orf106Q9H6K1 298 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-203ENST00000375315 FGF22Q9HCT0 170 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 PHPT1Q9NRX4 125 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-203ENST00000375315 PPP1R14DQ9NXH3 145 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 SCN8AQ9UQD0 1980 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 GFYI3L273 518 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 SLC25A12O75746 678 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 CH25HO95992 272 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 RD3LP0DJH9 198 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 EPXP11678 715 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 CD22P20273 847 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 DRD1P21728 446 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 IMPA1P29218 277 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 RIDAP52758 137 aaKnown RBP11.17□□□□□ -0.62
C9orf3-203ENST00000375315 TDGQ13569 410 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 PON3Q15166 354 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 ZNF761Q86XN6 746 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-203ENST00000375315 OPA3Q9H6K4 179 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 TREM1Q9NP99 234 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 A4GALTQ9NPC4 353 aa11.17□□□□□ -0.62
C9orf3-203ENST00000375315 DMDP11532 3685 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 A0A0G2JN53 185 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 A0A1B0GV90 55 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 ANKRD20A5PA0PJZ0 165 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 COLCA2A8K830 154 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 NUDT19A8MXV4 375 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 SLCO2B1O94956 709 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 PAPLNO95428 1278 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 ETHE1O95571 254 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 SLC35G4P0C7Q5 338 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 UQCRC2P22695 453 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 PPT1P50897 306 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 TAS2R43P59537 309 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 FZD5Q13467 585 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 ACSM3Q53FZ2 586 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 LIN54Q6MZP7 749 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 TNFAIP8L2Q6P589 184 aaPredicted RBP11.16□□□□□ -0.62
C9orf3-203ENST00000375315 PXKQ7Z7A4 578 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 CMTM4Q8IZR5 234 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 ARL11Q969Q4 196 aa11.16□□□□□ -0.62
C9orf3-203ENST00000375315 NEIL2Q969S2 332 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms