RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 STARD4Q96DR4 205 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 ALPK1Q96QP1 1244 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 PIGMQ9H3S5 423 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 KRCC1Q9NPI7 259 aaPredicted RBP13.36□□□□□ -0.27
HSPG2-201ENST00000374673 ARMC1Q9NVT9 282 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 EMC3Q9P0I2 261 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 TMEM5Q9Y2B1 443 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 FLVCR1Q9Y5Y0 555 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 PCNX1Q96RV3 2341 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 LOC102725191A0A1B0GVB3 256 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 MS4A18H0YCH9 400 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 TNFRSF11BO00300 401 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 PLPP3O14495 311 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 CGAP01215 116 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 CD8BP10966 210 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 BMP5P22003 454 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 ZP4Q12836 540 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 PMS2P3Q13401 168 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 KPNB1Q14974 876 aaKnown RBP13.35□□□□□ -0.27
HSPG2-201ENST00000374673 CDSNQ15517 529 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 EXOC3L2Q2M3D2 409 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 MS4A18Q3C1V0 323 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 TMPRSS11FQ6ZWK6 438 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 CDK20Q8IZL9 346 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 LRRC17Q8N6Y2 441 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 OR9K2Q8NGE7 335 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 OXGR1Q96P68 337 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 REEP1Q9H902 201 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 PLSCR4Q9NRQ2 329 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 JKAMPQ9P055 326 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 B3GAT1Q9P2W7 334 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 TMCC3Q9ULS5 477 aa13.35□□□□□ -0.27
HSPG2-201ENST00000374673 MSTNO14793 375 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 HIST1H2ABP04908 130 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 TSPAN19P0C672 248 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 MAKP20794 623 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 OMPP47874 163 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 SLC9A3P48764 834 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 PUDPQ08623 228 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 ANKDD1AQ495B1 522 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 HIST3H2AQ7L7L0 130 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 NUFIP2Q7Z417 695 aaKnown RBP13.34□□□□□ -0.27
HSPG2-201ENST00000374673 NANOGNBQ7Z5D8 188 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 BTLAQ7Z6A9 289 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 GALNT5Q7Z7M9 940 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 GPAT4Q86UL3 456 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 KDM8Q8N371 416 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 LINC00471Q8N535 108 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 HIST1H2ACQ93077 130 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 TMEM45BQ96B21 275 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 DENND2DQ9H6A0 471 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-201ENST00000374673 VNN3Q9NY84 501 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 TAS2R5Q9NYW4 299 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 DNAJB9Q9UBS3 223 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 PROCRQ9UNN8 238 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 NOSIPQ9Y314 301 aaKnown RBP13.34□□□□□ -0.27
HSPG2-201ENST00000374673 SAMHD1Q9Y3Z3 626 aaKnown RBP13.34□□□□□ -0.27
HSPG2-201ENST00000374673 HCFC1P51610 2035 aa13.34□□□□□ -0.27
HSPG2-201ENST00000374673 FAM90A27PA6NNH2 459 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 EFCAB9A8MZ26 197 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 OR10H3O60404 316 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 TIPRLO75663 272 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 OR6A2O95222 327 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 HPRP00739 348 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 ADORA3P0DMS8 318 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 SAGP10523 405 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-201ENST00000374673 ZNF43P17038 809 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 IFNGR2P38484 337 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 GPR4P46093 362 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 ASCL1P50553 236 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 RPS4XP62701 263 aaKnown RBP13.33□□□□□ -0.28
HSPG2-201ENST00000374673 CREB3L2Q70SY1 520 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 PXKQ7Z7A4 578 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 EPHX4Q8IUS5 362 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 ZIC4Q8N9L1 334 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 FAM46AQ96IP4 442 aaKnown RBP13.33□□□□□ -0.28
HSPG2-201ENST00000374673 UCK2Q9BZX2 261 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 KCNJ16Q9NPI9 418 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 HIF3AQ9Y2N7 669 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 AP4S1Q9Y587 144 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 NOX1Q9Y5S8 564 aa13.33□□□□□ -0.28
HSPG2-201ENST00000374673 CACNA1CQ13936 2221 aa13.32□□□□□ -0.28
HSPG2-201ENST00000374673 A8MXE2 369 aa13.32□□□□□ -0.28
HSPG2-201ENST00000374673 EEF1E1-BLOC1S5C9J1V9 151 aa13.32□□□□□ -0.28
HSPG2-201ENST00000374673 GNGT2O14610 69 aa13.32□□□□□ -0.28
HSPG2-201ENST00000374673 CDC42EP2O14613 210 aa13.32□□□□□ -0.28
HSPG2-201ENST00000374673 CLOCKO15516 846 aa13.32□□□□□ -0.28
HSPG2-201ENST00000374673 EEF1E1O43324 174 aaKnown RBP13.32□□□□□ -0.28
HSPG2-201ENST00000374673 HNRNPRO43390 633 aaKnown RBP13.32□□□□□ -0.28
HSPG2-201ENST00000374673 KLF4O43474 513 aa13.32□□□□□ -0.28
HSPG2-201ENST00000374673 TRAF3IP2O43734 574 aaPredicted RBP13.32□□□□□ -0.28
HSPG2-201ENST00000374673 DEAF1O75398 565 aaPredicted RBP13.32□□□□□ -0.28
HSPG2-201ENST00000374673 SMNDC1O75940 238 aaKnown RBP eCLIP13.32□□□□□ -0.28
HSPG2-201ENST00000374673 CCNB2O95067 398 aa13.32□□□□□ -0.28
HSPG2-201ENST00000374673 FCGR1AP12314 374 aa13.32□□□□□ -0.28
HSPG2-201ENST00000374673 UQCRC1P31930 480 aa13.32□□□□□ -0.28
HSPG2-201ENST00000374673 NTF4P34130 210 aa13.32□□□□□ -0.28
HSPG2-201ENST00000374673 OR3A2P47893 321 aa13.32□□□□□ -0.28
HSPG2-201ENST00000374673 RPL18Q07020 188 aaKnown RBP13.32□□□□□ -0.28
HSPG2-201ENST00000374673 PPP1R8Q12972 351 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms