RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 MRPL48Q96GC5 212 aaKnown RBP11.01□□□□□ -0.65
HMGCL-202ENST00000374487 AGAP4Q96P64 663 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 TMEM43Q9BTV4 400 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 NRSN2Q9GZP1 204 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 PPIL3Q9H2H8 161 aaKnown RBP11.01□□□□□ -0.65
HMGCL-202ENST00000374487 COPS7AQ9UBW8 275 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 MKL2Q9ULH7 1088 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 TCRBV16S1A1N1A0A5B0 115 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 OR6C68A6NDL8 312 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 TFECO14948 347 aaPredicted RBP11.01□□□□□ -0.65
HMGCL-202ENST00000374487 HCRTR2O43614 444 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 ICOSLGO75144 302 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 SERPINA3P01011 423 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 TFP02787 698 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 SPI1P17947 270 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 ACP1P24666 158 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 ITPKBP27987 946 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 AQP2P41181 271 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 CASP3P42574 277 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 INPP1P49441 399 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 NR0B1P51843 470 aaKnown RBP11.01□□□□□ -0.65
HMGCL-202ENST00000374487 RPS4XP62701 263 aaKnown RBP11.01□□□□□ -0.65
HMGCL-202ENST00000374487 GGTLC2Q14390 218 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 ZNF74Q16587 644 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.01□□□□□ -0.65
HMGCL-202ENST00000374487 ACSM3Q53FZ2 586 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 HBMQ6B0K9 141 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 DMKNQ6E0U4 476 aaPredicted RBP11.01□□□□□ -0.65
HMGCL-202ENST00000374487 JAZF1Q86VZ6 243 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 TPRA1Q86W33 373 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 UBE2J2Q8N2K1 259 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 RFLNBQ8N5W9 214 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 ADAMTS14Q8WXS8 1223 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 ADIPOR1Q96A54 375 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 DUSP23Q9BVJ7 150 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 NUDT9Q9BW91 350 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 SLC7A5P2Q9GIP4 190 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 PPP1R3EQ9H7J1 279 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 SYNDIG1Q9H7V2 258 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 FGF21Q9NSA1 209 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 GNG8Q9UK08 70 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 COL5A1P20908 1838 aaPredicted RBP11.01□□□□□ -0.65
HMGCL-202ENST00000374487 ASXL3Q9C0F0 2248 aa11.01□□□□□ -0.65
HMGCL-202ENST00000374487 TEX13CA0A0J9YWL9 993 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 A0A1B0GX78 115 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 A0A1W2PRG6 482 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 MAGEB4O15481 346 aaPredicted RBP11□□□□□ -0.65
HMGCL-202ENST00000374487 CCNKO75909 580 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 NUDT14O95848 222 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 HIST1H2ABP04908 130 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 PTBP1P26599 531 aaKnown RBP eCLIP11□□□□□ -0.657e-9■■□□□ 12.1
HMGCL-202ENST00000374487 CSF2RBP32927 897 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 TALDO1P37837 337 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 INSM1Q01101 510 aaPredicted RBP11□□□□□ -0.65
HMGCL-202ENST00000374487 NR0B2Q15466 257 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 ISXQ2M1V0 245 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 ALG10Q5BKT4 473 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 SLC35D3Q5M8T2 416 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 ZNF544Q6NX49 715 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 LEG1Q6P5S2 330 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 HIST3H2AQ7L7L0 130 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 SLC29A4Q7RTT9 530 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 OR14A16Q8NHC5 309 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 HIST1H2ACQ93077 130 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 CCDC74AQ96AQ1 378 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 SLC41A2Q96JW4 573 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 PGLYRP3Q96LB9 341 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 MOGAT1Q96PD6 335 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 C11orf54Q9H0W9 315 aaPredicted RBP11□□□□□ -0.65
HMGCL-202ENST00000374487 PMS2P1A4D2B8 440 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 NDUFB5O43674 189 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 SELENOFO60613 162 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 IGF2P01344 180 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 IMPDH2P12268 514 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 TACR3P29371 465 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 SLC6A8P48029 635 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 CTXN1P60606 82 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 SIRPAP78324 504 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 PLCXD2Q0VAA5 305 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 EBPQ15125 230 aaKnown RBP11□□□□□ -0.65
HMGCL-202ENST00000374487 P2RY14Q15391 338 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 HES3Q5TGS1 186 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 PAMR1Q6UXH9 720 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 TMPRSS9Q7Z410 1059 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 NR2C2APQ86WQ0 139 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 UBQLNLQ8IYU4 475 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 SYS1Q8N2H4 156 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 ENKURQ8TC29 256 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 THAP4Q8WY91 577 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 KCTD12Q96CX2 325 aaKnown RBP11□□□□□ -0.65
HMGCL-202ENST00000374487 PELI1Q96FA3 418 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 Q96M85 177 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 DEPDC7Q96QD5 511 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 SOSTQ9BQB4 213 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 TBL1XR1Q9BZK7 514 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 LAT2Q9GZY6 243 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 MMP28Q9H239 520 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 MMP25Q9NPA2 562 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 NPAP1Q9NZP6 1156 aa11□□□□□ -0.65
HMGCL-202ENST00000374487 ATXN7L1Q9ULK2 861 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms