RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SVBPQ8N300 66 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 LILRA3Q8N6C8 439 aaPredicted RBP13.3□□□□□ -0.28
TRAF1-201ENST00000373887 TMEM217Q8N7C4 229 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 SEC22AQ96IW7 307 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 TAS2R16Q9NYV7 291 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 C20orf202A1L168 122 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 AQP7O14520 342 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 F13BP05160 661 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 ANKRD33Q7Z3H0 272 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 ASB16Q96NS5 453 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 THAP10Q9P2Z0 257 aaPredicted RBP13.3□□□□□ -0.28
TRAF1-201ENST00000373887 ATXN1LP0C7T5 689 aaKnown RBP13.3□□□□□ -0.28
TRAF1-201ENST00000373887 GLI3P10071 1580 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 FBXO27Q8NI29 283 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 SECTM1Q8WVN6 248 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 ANKRD9Q96BM1 317 aaPredicted RBP13.3□□□□□ -0.28
TRAF1-201ENST00000373887 MYH9P35579 1960 aaKnown RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 K7ESM1 405 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 TIMM8AO60220 97 aaPredicted RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 HTR5AP47898 357 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 DCDP81605 110 aaKnown RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 POU3F1Q03052 451 aaPredicted RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 B3GNT8Q7Z7M8 397 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 GRAMD2AQ8IUY3 354 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 PARP16Q8N5Y8 322 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 RTP4Q96DX8 246 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 SLC39A13Q96H72 371 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 METTL17Q9H7H0 456 aaPredicted RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 HSFX1Q9UBD0 423 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 MICAL3Q7RTP6 2002 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 CLDN1O95832 211 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 TK1P04183 234 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 BMP2P12643 396 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 CLDN12P56749 244 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 HSF5Q4G112 596 aaPredicted RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 BCL7AQ4VC05 210 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 MEPCEQ7L2J0 689 aaKnown RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 OR56B4Q8NH76 319 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 ARRDC1-AS1Q9H2J1 176 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 MED20Q9H944 212 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 IGHV3-20A0A0C4DH32 117 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 H7C1C5 153 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 SLC31A2O15432 143 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 ABLIM3O94929 683 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 LCN6P62502 163 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 OVCH1Q7RTY7 1134 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 BCL7CQ8WUZ0 217 aaPredicted RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 ZC3HAV1LQ96H79 300 aaKnown RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 ZNF300Q96RE9 604 aaPredicted RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 GINS3Q9BRX5 216 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 VN1R3Q9BXE9 311 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 HHLA2Q9UM44 414 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 PCDHGA5Q9Y5G8 931 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 C2CD4DB7Z1M9 353 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 SLC5A2P31639 672 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 CSNK1DP48730 415 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 INHBCP55103 352 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 RELAQ04206 551 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 CLINT1Q14677 625 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 OR2T27Q8NH04 317 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 ELSPBP1Q96BH3 223 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 RAB39BQ96DA2 213 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 UTP23Q9BRU9 249 aaKnown RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 METTL9Q9H1A3 318 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 OR52D1Q9H346 318 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 MTCH1Q9NZJ7 389 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 SLC22A23A1A5C7 686 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 OR7C1O76099 320 aaPredicted RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 B3GALT4O96024 378 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 PODNL1Q6PEZ8 512 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 OR1E3Q8WZA6 343 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 H1FXQ92522 213 aaKnown RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 OR7D2Q96RA2 312 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 C1QTNF2Q9BXJ5 285 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 ANKRD60Q9BZ19 345 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 TREX1Q9NSU2 369 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 BTNL2Q9UIR0 455 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 PURGQ9UJV8 347 aaKnown RBP13.29□□□□□ -0.28
TRAF1-201ENST00000373887 ZNF337Q9Y3M9 751 aa13.29□□□□□ -0.28
TRAF1-201ENST00000373887 TNFRSF10AO00220 468 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 CACNG3O60359 315 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 IL1AP01583 271 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 TACR3P29371 465 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 YPEL5P62699 121 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 TATDN3Q17R31 274 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 CCDC71Q8IV32 467 aaPredicted RBP13.28□□□□□ -0.28
TRAF1-201ENST00000373887 VRK3Q8IV63 474 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 OR5D18Q8NGL1 313 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 OR6T1Q8NGN1 323 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 IFI44Q8TCB0 444 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 SLC29A1Q99808 456 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 ZNF891A8MT65 544 aaPredicted RBP13.28□□□□□ -0.28
TRAF1-201ENST00000373887 RNASET2O00584 256 aaKnown RBP13.28□□□□□ -0.28
TRAF1-201ENST00000373887 HSD17B6O14756 317 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 OR2T1O43869 369 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 FOLR1P15328 257 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 HIST1H1TP22492 207 aaPredicted RBP13.28□□□□□ -0.28
TRAF1-201ENST00000373887 NFYAP23511 347 aaPredicted RBP13.28□□□□□ -0.28
TRAF1-201ENST00000373887 TIGD3Q6B0B8 471 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms