RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 OR10R2Q8NGX6 335 aa13.2□□□□□ -0.3
LMX1B-202ENST00000373474 NANPQ8TBE9 248 aa13.2□□□□□ -0.3
LMX1B-202ENST00000373474 GABARAPL1Q9H0R8 117 aa13.2□□□□□ -0.3
LMX1B-202ENST00000373474 MED20Q9H944 212 aa13.2□□□□□ -0.3
LMX1B-202ENST00000373474 C1GALT1Q9NS00 363 aa13.2□□□□□ -0.3
LMX1B-202ENST00000373474 MARCH5Q9NX47 278 aa13.2□□□□□ -0.3
LMX1B-202ENST00000373474 HTR1FP30939 366 aa13.2□□□□□ -0.3
LMX1B-202ENST00000373474 HABP2Q14520 560 aaPredicted RBP13.2□□□□□ -0.3
LMX1B-202ENST00000373474 FAM3CQ92520 227 aa13.2□□□□□ -0.3
LMX1B-202ENST00000373474 HHLA2Q9UM44 414 aa13.2□□□□□ -0.3
LMX1B-202ENST00000373474 RNF212BA8MTL3 300 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 H3BML4 177 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 HLA-DOBP13765 273 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 LAP3P28838 519 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 XCR1P46094 333 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 RAB38P57729 211 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 ERVFC1P60507 584 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 SNRPGP62308 76 aaKnown RBP13.19□□□□□ -0.3
LMX1B-202ENST00000373474 RAB35Q15286 201 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 GTF2H5Q6ZYL4 71 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 FCRLAQ7L513 359 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 EPHX3Q9H6B9 360 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 NRIP3Q9NQ35 241 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 RHBDD3Q9Y3P4 386 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 SLC9B1P1A6NJY1 282 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 PER3P56645 1201 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 CST9LP1Q5W188 147 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 LINC00299Q6ZSB3 139 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 LMNTD1Q8N9Z9 388 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 NANOS1Q8WY41 292 aaKnown RBP13.19□□□□□ -0.3
LMX1B-202ENST00000373474 UBQLN4Q9NRR5 601 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 POLHQ9Y253 713 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 TOGARAM1Q9Y4F4 1720 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 BCORQ6W2J9 1755 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.19□□□□□ -0.3
LMX1B-202ENST00000373474 ZNF195O14628 629 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 SLX4IPQ5VYV7 408 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 ZNF852Q6ZMS4 543 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 YIPF5Q969M3 257 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 ACKR4Q9NPB9 350 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 A0A0B4J2A0 478 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 MPPED1O15442 326 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 ADAM23O75077 832 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 ELK1P19419 428 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 PCSK6P29122 969 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 IDUAP35475 653 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 TAGLN2P37802 199 aaKnown RBP13.19□□□□□ -0.3
LMX1B-202ENST00000373474 LIPAP38571 399 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 C4orf17Q53FE4 359 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 ADAMTSL4Q6UY14 1074 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 KIAA0907Q7Z7F0 614 aaPredicted RBP13.19□□□□□ -0.3
LMX1B-202ENST00000373474 CELF2-AS1Q8N7Q2 184 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 OR14L1PQ8NHC6 308 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 RBM24Q9BX46 236 aaKnown RBP13.19□□□□□ -0.3
LMX1B-202ENST00000373474 MCOLN1Q9GZU1 580 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 SHPKQ9UHJ6 478 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 A3GALT2U3KPV4 340 aa13.19□□□□□ -0.3
LMX1B-202ENST00000373474 SRPXP78539 464 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 CTBSQ01459 385 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 ACVR1Q04771 509 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 PDLIM3Q53GG5 364 aaPredicted RBP13.18□□□□□ -0.3
LMX1B-202ENST00000373474 BEX5Q5H9J7 111 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 ZNF574Q6ZN55 896 aaPredicted RBP13.18□□□□□ -0.3
LMX1B-202ENST00000373474 MOB1BQ7L9L4 216 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 OR4K15Q8NH41 348 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 NPRL2Q8WTW4 380 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 TPSD1Q9BZJ3 242 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 PURGQ9UJV8 347 aaKnown RBP13.18□□□□□ -0.3
LMX1B-202ENST00000373474 SLC6A14Q9UN76 642 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 UGT2A1Q9Y4X1 527 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 LOXHD1Q8IVV2 1947 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 LRP5LA4QPB2 252 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 HIDE1A8MVS5 230 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 SLC16A7O60669 478 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 MT-ND4LP03901 98 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 F11P03951 625 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 PRPH2P23942 346 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 PTBP1P26599 531 aaKnown RBP eCLIP13.18□□□□□ -0.3
LMX1B-202ENST00000373474 PHYHD1Q5SRE7 291 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 HENMT1Q5T8I9 393 aaKnown RBP13.18□□□□□ -0.3
LMX1B-202ENST00000373474 FAM71E1Q6IPT2 247 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 SFXN4Q6P4A7 337 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 MRPL43Q8N983 215 aaKnown RBP13.18□□□□□ -0.3
LMX1B-202ENST00000373474 ELOVL3Q9HB03 270 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 DNMT3BQ9UBC3 853 aaKnown RBP13.18□□□□□ -0.3
LMX1B-202ENST00000373474 SUSD2Q9UGT4 822 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 MOKQ9UQ07 419 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 CYB5BO43169 146 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 TNFSF12O43508 249 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 CPNE6O95741 557 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 OR2T7P0C7T2 308 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 CR2P20023 1033 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 OR2T27Q8NH04 317 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 FAM213BQ8TBF2 198 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 ARRDC3Q96B67 414 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 SLCO4A1Q96BD0 722 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 ANKRD19PQ9H560 264 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 SYT5O00445 386 aa13.18□□□□□ -0.3
LMX1B-202ENST00000373474 SNRPBP14678 240 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms