RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 E7EQL1 145 aa16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 IGHV4-31P0DP07 118 aa16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 RGS8P57771 180 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 BNIP2Q12982 314 aa16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 OR7A5Q15622 319 aa16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 NET1Q7Z628 596 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 SNX32Q86XE0 403 aa16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 C10orf82Q8WW14 230 aa16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 HTRA1Q92743 480 aa16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 ZNF775Q96BV0 537 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 SH3GL1Q99961 368 aa16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 KAT8Q9H7Z6 458 aaKnown RBP16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 EVA1AQ9H8M9 152 aa16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 TESQ9UGI8 421 aaKnown RBP16.84■□□□□ 0.29
TRAPPC3-204ENST00000373166 LIPT2A6NK58 231 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 TMEM229AB2RXF0 380 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 H7C417 338 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 SLC22A2O15244 555 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 TPST1O60507 370 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 AHSA1O95433 338 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 BMP4P12644 408 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 ZNF16P17020 682 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 COX5AP20674 150 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 USF1P22415 310 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 IGHV1-2P23083 117 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 PTAFRP25105 342 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 FABP6P51161 128 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 SLC16A1P53985 500 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 CEACAM7Q14002 265 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 OTUD3Q5T2D3 398 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 C1orf140Q5VVS0 124 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 PAQR6Q6TCH4 344 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 KLHL17Q6TDP4 642 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 CCDC103Q8IW40 242 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 DEPDC4Q8N2C3 294 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 ARIH2OSQ8N7S6 290 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 PCYOX1LQ8NBM8 494 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 OR52E4Q8NGH9 312 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 OR10A6Q8NH74 314 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 C10orf105Q8TEF2 133 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 APH1AQ96BI3 265 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 LRRC58Q96CX6 371 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 ZNF317Q96PQ6 595 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 SLC9A8Q9Y2E8 581 aa16.83■□□□□ 0.28
TRAPPC3-204ENST00000373166 NPPAP01160 153 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 CSF3P09919 207 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 PCGF2P35227 344 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 GZMKP49863 264 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 PCBP3P57721 371 aaKnown RBP16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 LSM11P83369 360 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 H3F3AP84243 136 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 GLIPR1L2Q4G1C9 344 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 INTS11Q5TA45 600 aaKnown RBP16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 PATL1Q86TB9 770 aaKnown RBP16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 COMTD1Q86VU5 262 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 RANBP3LQ86VV4 465 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 LSRQ86X29 649 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 LSMEM1Q8N8F7 131 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 OR8J3Q8NGG0 315 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 STK35Q8TDR2 534 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 C12orf10Q9HB07 376 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 GID8Q9NWU2 228 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 ADPRHL2Q9NX46 363 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 SELENONQ9NZV5 590 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 KCNS2Q9ULS6 477 aa16.82■□□□□ 0.28
TRAPPC3-204ENST00000373166 A0A1B0GWA3 101 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 FXYD1O00168 92 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 MRPL33O75394 65 aaKnown RBP16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 MFN2O95140 757 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 AKR7A3O95154 331 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 OPN1SWP03999 348 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 PNMTP11086 282 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 EDNRAP25101 427 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 CD40P25942 277 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 HTR2AP28223 471 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 GTF2E2P29084 291 aaKnown RBP16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 EFNA4P52798 201 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 ALG10BQ5I7T1 473 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 NANOGP8Q6NSW7 305 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 ZNF544Q6NX49 715 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 C6orf89Q6UWU4 347 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 CASP12Q6UXS9 341 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 UBE2J2Q8N2K1 259 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 ZNF433Q8N7K0 673 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 SMYD1Q8NB12 490 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 DNAJA4Q8WW22 397 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 ECSITQ9BQ95 431 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 RSPO3Q9BXY4 272 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 NANOGQ9H9S0 305 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 TMEM27Q9HBJ8 222 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 ARMCX1Q9P291 453 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 CADP27708 2225 aa16.81■□□□□ 0.28
TRAPPC3-204ENST00000373166 LOC100653049A0A140TA62 436 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 CIB4A0PJX0 185 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 AQP7P3A6NL99 342 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 CCDC22O60826 627 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 KRT34O76011 436 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 ZNF83P51522 516 aa16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 SRSF2Q01130 221 aaKnown RBP16.8■□□□□ 0.28
TRAPPC3-204ENST00000373166 CHRNB3Q05901 458 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms