RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 MAP3K8P41279 467 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 RBM34P42696 430 aaKnown RBP14.99□□□□□ -0.01
SDC4-201ENST00000372733 CSRP2Q16527 193 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 EID2Q8N6I1 236 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 OR10G6Q8NH81 332 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 FLVCR1-AS1Q8TAF5 88 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 HAVCR1Q96D42 359 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 CFHR5Q9BXR6 569 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 FBXL21Q9UKT6 434 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 GRXCR1A8MXD5 290 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 ACOT7O00154 380 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 KAT7O95251 611 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 IGKV1D-16P01601 117 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 OR8G3PP0DMU2 310 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 ERVK-25P63136 954 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 RD3Q7Z3Z2 195 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 OR52R1Q8NGF1 315 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 SGTBQ96EQ0 304 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 SIPA1Q96FS4 1042 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 ASB16Q96NS5 453 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 APOOQ9BUR5 198 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 TRIM2Q9C040 744 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 RSPH9Q9H1X1 276 aaPredicted RBP14.99□□□□□ -0.01
SDC4-201ENST00000372733 CD93Q9NPY3 652 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 FXYD6-FXYD2A0A087WZ82 144 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 TCRBV16S1A1N1A0A5B0 115 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 OR6C65A6NJZ3 312 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 H3BSH0 61 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 SLC31A1O15431 190 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 FKTNO75072 461 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 AK1P00568 194 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 H2BFSP57053 126 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 SEC61A1P61619 476 aaKnown RBP14.98□□□□□ -0.01
SDC4-201ENST00000372733 FCRL6Q6DN72 434 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 ARSKQ6UWY0 536 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 STAC2Q6ZMT1 411 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 OR14C36Q8NHC7 312 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 CCL4L1Q8NHW4 92 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 RPS4Y2Q8TD47 263 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 PHYHIPQ92561 330 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 UTP23Q9BRU9 249 aaKnown RBP14.98□□□□□ -0.01
SDC4-201ENST00000372733 TMPRSS13Q9BYE2 586 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 FXYD6Q9H0Q3 95 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 PILRAQ9UKJ1 303 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 KLHDC2Q9Y2U9 406 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 HEBP2Q9Y5Z4 205 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 USP34Q70CQ2 3546 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 SLC22A23A1A5C7 686 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 ATP6V1G2-DDX39BF2Z307 99 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 SULT1B1O43704 296 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 TSPAN9O75954 239 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 GPR75O95800 540 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 CBX7O95931 251 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 TIMP1P01033 207 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 IL5P05113 134 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 RAB40ALP0C0E4 278 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 ZNF35P13682 527 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 PVRP15151 417 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 ART1P52961 327 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 MELKQ14680 651 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 PRRT3Q5FWE3 981 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 RTL10Q7L3V2 364 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 TMPRSS12Q86WS5 348 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 ZNF511Q8NB15 262 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 RAB40AQ8WXH6 277 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 TOE1Q96GM8 510 aaKnown RBP14.98□□□□□ -0.01
SDC4-201ENST00000372733 OR2M4Q96R27 311 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 SLC17A9Q9BYT1 436 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 SLC6A17Q9H1V8 727 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 OPN4Q9UHM6 478 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 SESN1Q9Y6P5 492 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 ATG2BQ96BY7 2078 aa14.98□□□□□ -0.01
SDC4-201ENST00000372733 SNRPGP15A8MWD9 76 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 NUPL2O15504 423 aaKnown RBP14.97□□□□□ -0.01
SDC4-201ENST00000372733 RP2O75695 350 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 B3GALNT1O75752 331 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 FCER2P06734 321 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 S100A11P31949 105 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 RPS21P63220 83 aaKnown RBP14.97□□□□□ -0.01
SDC4-201ENST00000372733 ILF3Q12906 894 aaKnown RBP eCLIP14.97□□□□□ -0.01
SDC4-201ENST00000372733 TMUB2Q71RG4 321 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 ABHD13Q7L211 337 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 SLC35F3Q8IY50 421 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 MIB2Q96AX9 1013 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 Q96M85 177 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 TSSK2Q96PF2 358 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 DMRTA2Q96SC8 542 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 B3GNT4Q9C0J1 378 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 ARL6Q9H0F7 186 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 TCF7L1Q9HCS4 588 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 MKKSQ9NPJ1 570 aaPredicted RBP14.97□□□□□ -0.01
SDC4-201ENST00000372733 TICRRQ7Z2Z1 1910 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 SPTBP11277 2137 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 A0A1B0GTH9 108 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 PRSS38A1L453 326 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 CYR61O00622 381 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 NKX2-2O95096 273 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 HIST1H2ABP04908 130 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 IFNA16P05015 189 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 ITPKBP27987 946 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms