RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 PHF1O43189 567 aaPredicted RBP14.27□□□□□ -0.13
COL5A1-201ENST00000371817 OLFM2O95897 454 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 GABRA4P48169 554 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 C3orf38Q5JPI3 329 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 CTSL3PQ5NE16 218 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 Q6ZVU0 165 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 OR13D1Q8NGV5 346 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 SECTM1Q8WVN6 248 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 POM121Q96HA1 1249 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 XYLT2Q9H1B5 865 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 TLR9Q9NR96 1032 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 ACSS1Q9NUB1 689 aaPredicted RBP14.27□□□□□ -0.13
COL5A1-201ENST00000371817 NRP1O14786 923 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 RGS11O94810 467 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 MTHFD2P13995 350 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 APEX1P27695 318 aaKnown RBP14.26□□□□□ -0.13
COL5A1-201ENST00000371817 HTR2CP28335 458 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 GPR18Q14330 331 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 OR4A16Q8NH70 328 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 ALG12Q9BV10 488 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 HRASLSQ9HDD0 168 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 ZNFX1Q9P2E3 1918 aaKnown RBP14.26□□□□□ -0.13
COL5A1-201ENST00000371817 NPIPA5A0A0B4J1W7 369 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 ACSM4P0C7M7 580 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 LAG3P18627 525 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 ILKQ13418 452 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 TRIM61Q5EBN2 209 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 TMEM175Q9BSA9 504 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 TMEM231Q9H6L2 316 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 UCK1Q9HA47 277 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 GYPBP06028 91 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 OR8U8P0C7N1 319 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 OR10A3P58181 314 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 ERVPABLB-1P60509 514 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 TMEM97Q5BJF2 176 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 LOC102725191A0A1B0GVB3 256 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 FEZF1A0PJY2 475 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 C5AR1P21730 350 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 RFX2P48378 723 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 CATR1Q13166 79 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 PQLC3Q8N755 202 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 OR2T27Q8NH04 317 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 FAM3CQ92520 227 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 ADAM23O75077 832 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 MPC1LP0DKB6 136 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 MPGP29372 298 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 DEFB134Q4QY38 66 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 SYT17Q9BSW7 474 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 BTNL2Q9UIR0 455 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 AQP7O14520 342 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 CNMDO75829 334 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 HBA1P69905 142 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 CDC20Q12834 499 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 DOC2AQ14183 400 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 ELF4Q99607 663 aaPredicted RBP14.26□□□□□ -0.13
COL5A1-201ENST00000371817 CDH20Q9HBT6 801 aa14.26□□□□□ -0.13
COL5A1-201ENST00000371817 CHD3Q12873 2000 aaKnown RBP14.25□□□□□ -0.13
COL5A1-201ENST00000371817 RPS25P62851 125 aaKnown RBP14.25□□□□□ -0.13
COL5A1-201ENST00000371817 ZXDBP98169 803 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 FABP9Q0Z7S8 132 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 GPR17Q13304 367 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 GRM7Q14831 915 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 TMEM182Q6ZP80 229 aaPredicted RBP14.25□□□□□ -0.13
COL5A1-201ENST00000371817 SGPP1Q9BX95 441 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 FAM183AA6NL82 134 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 SUSD5O60279 629 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 GALTP07902 379 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 QDPRP09417 244 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 CDONQ4KMG0 1287 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 SLC35D2Q76EJ3 337 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF534Q76KX8 674 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 SLC2A11Q9BYW1 496 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 CFHP08603 1231 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF91Q05481 1191 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 SMN1Q16637 294 aaKnown RBP14.25□□□□□ -0.13
COL5A1-201ENST00000371817 OR14J1Q9UGF5 321 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 PSORS1C1Q9UIG5 152 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 PRAMEF11O60813 436 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 S1PR4O95977 384 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 PMP2P02689 132 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 CCR9P51686 369 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 L3MBTL4Q8NA19 623 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 OR1J2Q8NGS2 313 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 LIPHQ8WWY8 451 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 PADI3Q9ULW8 664 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 ABCA1O95477 2261 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 C7orf72A4D263 438 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 TMEM221A6NGB7 291 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 NUDT21O43809 227 aaKnown RBP14.25□□□□□ -0.13
COL5A1-201ENST00000371817 RPL29P47914 159 aaKnown RBP14.25□□□□□ -0.13
COL5A1-201ENST00000371817 SLC6A8P48029 635 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 BPIFA2Q96DR5 249 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 GATCO43716 136 aaKnown RBP14.25□□□□□ -0.13
COL5A1-201ENST00000371817 DUSP1P28562 367 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 ETFDHQ16134 617 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 SYT6Q5T7P8 510 aaPredicted RBP14.25□□□□□ -0.13
COL5A1-201ENST00000371817 ESPNLQ6ZVH7 1005 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 MR1Q95460 341 aa14.25□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF689Q96CS4 500 aaPredicted RBP14.25□□□□□ -0.13
COL5A1-201ENST00000371817 FBXL12Q9NXK8 326 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms