RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 MBP02144 154 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CLPSP04118 112 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ME2P23368 584 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 BDKRB2P30411 391 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 HMOX2P30519 316 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 HNRNPH1P31943 449 aaKnown RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 AHRP35869 848 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 DDOSTP39656 456 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 BLKP51451 505 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ADAM8P78325 824 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 SRSF1Q07955 248 aaKnown RBP eCLIP3.52□□□□□ -1.85
MCF2-203ENST00000370576 CEACAM7Q14002 265 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CST6Q15828 149 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CSRP2Q16527 193 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 SLC25A30Q5SVS4 291 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 FAM46CQ5VWP2 391 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 C3P1Q6ZMU1 363 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 C20orf204Q6ZNR8 217 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 RFLNAQ6ZTI6 216 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 P4HA3Q7Z4N8 544 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ADGRF3Q8IZF5 1079 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 SYS1Q8N2H4 156 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ZNF786Q8N393 782 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 MARVELD2Q8N4S9 558 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CSNK1A1LQ8N752 337 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 LMNTD1Q8N9Z9 388 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ZNF548Q8NEK5 533 aaPredicted RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 OR10H4Q8NGA5 316 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 OR56A4Q8NGH8 313 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 NANPQ8TBE9 248 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 SLC38A4Q969I6 547 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 MARVELD3Q96A59 401 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 NUS1Q96E22 293 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 BMFQ96LC9 184 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 KLHL32Q96NJ5 620 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 RDH12Q96NR8 316 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 NIPSNAP1Q9BPW8 284 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 AGPAT4Q9NRZ5 378 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 SLC25A37Q9NYZ2 338 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 EPHA6Q9UF33 1036 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 SLC22A7Q9Y694 548 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 LY6G6EA0A0G2JKS1 128 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 C2CD4DB7Z1M9 353 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 DSCR3O14972 297 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 MRPS14O60783 128 aaKnown RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 SLC2A4P14672 509 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ITPKBP27987 946 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 C21orf33P30042 268 aaPredicted RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 PRDX2P32119 198 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CEACAM6P40199 344 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 PTGFRP43088 359 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 RPS21P63220 83 aaKnown RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 SSBP2P81877 361 aaPredicted RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 CFHR1Q03591 330 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 BNIP2Q12982 314 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 MAD2L1Q13257 205 aaPredicted RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 MADCAM1Q13477 382 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 TSNQ15631 228 aaKnown RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 CPSF6Q16630 551 aaKnown RBP eCLIP3.52□□□□□ -1.85
MCF2-203ENST00000370576 AGKQ53H12 422 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ZNF776Q68DI1 518 aaPredicted RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 REP15Q6BDI9 236 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CCDC144NLQ6NUI1 221 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CD300LDQ6UXZ3 194 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 LINGO4Q6UY18 593 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 PLEKHG7Q6ZR37 379 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 HDDC2Q7Z4H3 204 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 LUZP2Q86TE4 346 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 C1QL4Q86Z23 238 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 POC1AQ8NBT0 407 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 FAM83FQ8NEG4 500 aaPredicted RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 SPRYD4Q8WW59 207 aaPredicted RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 ASB10Q8WXI3 467 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 HGDQ93099 445 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 LINGO1Q96FE5 620 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 RAB11FIP5Q9BXF6 653 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 NUF2Q9BZD4 464 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 POLR2J2Q9GZM3 115 aaKnown RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 SLC22A4Q9H015 551 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 PCBD2Q9H0N5 130 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 C11orf54Q9H0W9 315 aaPredicted RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 POLR2J3Q9H1A7 115 aaKnown RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 CENPHQ9H3R5 247 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 S100A14Q9HCY8 104 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 UFSP2Q9NUQ7 469 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ZFP69BQ9UJL9 534 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ICAM5Q9UMF0 924 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 U3KQA8 63 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 MYO10Q9HD67 2058 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 HEATR5BQ9P2D3 2071 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 RAB19A4D1S5 217 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ADARB2-AS1A8MUL3 147 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 E7ENX8 843 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 NEDD8-MDP1E9PL57 170 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 TIMM8AO60220 97 aaPredicted RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 NDUFA7O95182 113 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 MOCS2O96007 188 aaPredicted RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 IGHV2-70P01814 119 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 TFP02787 698 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 FCER2P06734 321 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms