RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 OR5M10Q6IEU7 315 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 KLBQ86Z14 1044 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 SLC2A12Q8TD20 617 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 AP3S1Q92572 193 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 RFKQ969G6 155 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 VSTM2LQ96N03 204 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 GPR137Q96N19 417 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 C12orf57Q99622 126 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 IER2Q9BTL4 223 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 KATNB1Q9BVA0 655 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 NUDT9Q9BW91 350 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 ZNF350Q9GZX5 532 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 RAB33BQ9H082 229 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 MED20Q9H944 212 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 ZFP64Q9NPA5 681 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 FAM86C1Q9NVL1 165 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 CALML5Q9NZT1 146 aa9.75□□□□□ -0.85
TPM3-212ENST00000368533 TESQ9UGI8 421 aaKnown RBP9.75□□□□□ -0.85
TPM3-212ENST00000368533 FITM1A5D6W6 292 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 H0YIG0 161 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 RRASP10301 218 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 GCGRP47871 477 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 HSD17B7P56937 341 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 SPEM2Q0P670 501 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 GPR139Q6DWJ6 353 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 MED25Q71SY5 747 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 OR11H7Q8NGC8 314 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 PFN4Q8NHR9 129 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 OSTF1Q92882 214 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 MS4A3Q96HJ5 214 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 ZC3H10Q96K80 434 aaKnown RBP9.74□□□□□ -0.85
TPM3-212ENST00000368533 GHITMQ9H3K2 345 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 RBFOX1Q9NWB1 397 aaKnown RBP9.74□□□□□ -0.85
TPM3-212ENST00000368533 TNFRSF10DQ9UBN6 386 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 PLEKHB1Q9UF11 243 aaPredicted RBP9.74□□□□□ -0.85
TPM3-212ENST00000368533 EXOSC1Q9Y3B2 195 aaKnown RBP9.74□□□□□ -0.85
TPM3-212ENST00000368533 ZNF175Q9Y473 711 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 IRGMA1A4Y4 181 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 ZC3H12DA2A288 527 aaKnown RBP9.74□□□□□ -0.85
TPM3-212ENST00000368533 LRRN3E7EW58 273 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 SOCS6O14544 535 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 LIMS3P0CW19 117 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 LIMS4P0CW20 117 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 SLC1A3P43003 542 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 GBX2P52951 348 aaPredicted RBP9.74□□□□□ -0.85
TPM3-212ENST00000368533 CTBP2P56545 445 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 POLR2GP62487 172 aaKnown RBP eCLIP9.74□□□□□ -0.85
TPM3-212ENST00000368533 DSG2Q14126 1118 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 LGALSLQ3ZCW2 172 aaPredicted RBP9.74□□□□□ -0.85
TPM3-212ENST00000368533 GXYLT1Q4G148 440 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 NKAIN1Q4KMZ8 207 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 PLBD1Q6P4A8 553 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 CD300LDQ6UXZ3 194 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 WDR88Q6ZMY6 472 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 COX15Q7KZN9 410 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 GDF7Q7Z4P5 450 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 PPP1R3BQ86XI6 285 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 GHDCQ8N2G8 530 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 BCORP1Q8N888 145 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 NEIL3Q8TAT5 605 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 ACOT11Q8WXI4 607 aaPredicted RBP9.74□□□□□ -0.85
TPM3-212ENST00000368533 DPH1Q9BZG8 443 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 OR51V1Q9H2C8 321 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 ZCCHC4Q9H5U6 513 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 Q9N2J8 555 aa9.74□□□□□ -0.85
TPM3-212ENST00000368533 A0A087WV62 115 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 IQCMA0A1B0GVH7 501 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 CHP2O43745 196 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 HPGDSO60760 199 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 PRAMEF2O60811 474 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 REM1O75628 298 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 LALBAP00709 142 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 FCRLBQ6BAA4 426 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 SLC23A3Q6PIS1 610 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 ZNF782Q6ZMW2 699 aaPredicted RBP9.73□□□□□ -0.85
TPM3-212ENST00000368533 RASSF6Q6ZTQ3 369 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 KLHL36Q8N4N3 616 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 MS4A15Q8N5U1 240 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 OR4Q3Q8NH05 313 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 SPRYD4Q8WW59 207 aaPredicted RBP9.73□□□□□ -0.85
TPM3-212ENST00000368533 DIO2Q92813 273 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 PRDM9Q9NQV7 894 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 DUSP22Q9NRW4 184 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 CBLCQ9ULV8 474 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 AUP1Q9Y679 476 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 IDSB3KWA1 339 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 D6RAR5 112 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 BRINP1O60477 761 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 ZGLP1P0C6A0 271 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 NUP62P37198 522 aaPredicted RBP9.73□□□□□ -0.85
TPM3-212ENST00000368533 FAM209BQ5JX69 171 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 CNIH2Q6PI25 160 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 CLDN22Q8N7P3 220 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 ZNF615Q8N8J6 731 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 OR2T33Q8NG76 320 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 OR10H4Q8NGA5 316 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 OR4D9Q8NGE8 314 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 CXorf58Q96LI9 332 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 RTN4RQ9BZR6 473 aa9.73□□□□□ -0.85
TPM3-212ENST00000368533 MED28Q9H204 178 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms