RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 DUS3LQ96G46 650 aaKnown RBP12.37□□□□□ -0.43
TPM3-211ENST00000368531 GMPPAQ96IJ6 420 aaPredicted RBP12.37□□□□□ -0.43
TPM3-211ENST00000368531 ZFP3Q96NJ6 502 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 UCK2Q9BZX2 261 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 KRCC1Q9NPI7 259 aaPredicted RBP12.37□□□□□ -0.43
TPM3-211ENST00000368531 ARMC1Q9NVT9 282 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 DNAJB9Q9UBS3 223 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 ZNF229Q9UJW7 825 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 ING1Q9UK53 422 aaPredicted RBP12.37□□□□□ -0.43
TPM3-211ENST00000368531 RASD1Q9Y272 281 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 TMEM5Q9Y2B1 443 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 B3GALT5Q9Y2C3 310 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 EMC9Q9Y3B6 208 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 PRRC2CQ9Y520 2896 aaKnown RBP12.37□□□□□ -0.43
TPM3-211ENST00000368531 ZNF462Q96JM2 2506 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 DIDO1Q9BTC0 2240 aaKnown RBP12.37□□□□□ -0.43
TPM3-211ENST00000368531 INTS1Q8N201 2190 aaKnown RBP12.36□□□□□ -0.43
TPM3-211ENST00000368531 TRAV27A0A087WT01 109 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 CDC42EP2O14613 210 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 SS18L1O75177 396 aaPredicted RBP12.36□□□□□ -0.43
TPM3-211ENST00000368531 DEAF1O75398 565 aaPredicted RBP12.36□□□□□ -0.43
TPM3-211ENST00000368531 LDLRP01130 860 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 YES1P07947 543 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 POU2F1P14859 743 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 FASP25445 335 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 AGTR1P30556 359 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 CHRNB4P30926 498 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 OPRM1P35372 400 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 AQP2P41181 271 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 OMPP47874 163 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 SLC17A1Q14916 467 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 CDSNQ15517 529 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 EEF1A1P5Q5VTE0 462 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 TMPRSS11FQ6ZWK6 438 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 FAM214BQ7L5A3 538 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 ZER1Q7Z7L7 766 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 OAFQ86UD1 273 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 C10orf67Q8IYJ2 551 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 HS3ST5Q8IZT8 346 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 FAM26EQ8N5C1 309 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 SCAIQ8N9R8 606 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 OR9K2Q8NGE7 335 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 MOSPD2Q8NHP6 518 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 GIPC3Q8TF64 312 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 CA5BP1Q8WTZ4 195 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 ITLN2Q8WWU7 325 aaPredicted RBP12.36□□□□□ -0.43
TPM3-211ENST00000368531 ASB5Q8WWX0 329 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 OXGR1Q96P68 337 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 TNFRSF13CQ96RJ3 184 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 SEMA6AQ9H2E6 1030 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 GLRX2Q9NS18 164 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 TAS2R5Q9NYW4 299 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 EMC3Q9P0I2 261 aa12.36□□□□□ -0.43
TPM3-211ENST00000368531 NOSIPQ9Y314 301 aaKnown RBP12.36□□□□□ -0.43
TPM3-211ENST00000368531 NKX2-6A6NCS4 301 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 EEF1E1-BLOC1S5C9J1V9 151 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 H3BNX3 289 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 DVL2O14641 736 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 EEF1E1O43324 174 aaKnown RBP12.35□□□□□ -0.43
TPM3-211ENST00000368531 RNF13O43567 381 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 TNFSF13O75888 250 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 IGF2P01344 180 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 F13BP05160 661 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 HLA-DOBP13765 273 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 ZNF43P17038 809 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 PRKACGP22612 351 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 DNAJA1P31689 397 aaKnown RBP12.35□□□□□ -0.43
TPM3-211ENST00000368531 IFNGR2P38484 337 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 CLDN17P56750 224 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 RPL18Q07020 188 aaKnown RBP12.35□□□□□ -0.43
TPM3-211ENST00000368531 PUDPQ08623 228 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 PDK3Q15120 406 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 ATP6AP1Q15904 470 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 MICAQ29983 383 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 HMBOX1Q6NT76 420 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 ZFP1Q6P2D0 407 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 PGBD2Q6P3X8 592 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 XKRXQ6PP77 449 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 CREB3L2Q70SY1 520 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 LUZP2Q86TE4 346 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 IGFN1Q86VF2 1251 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 UEVLDQ8IX04 471 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 AQP11Q8NBQ7 271 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 RELL2Q8NC24 303 aaPredicted RBP12.35□□□□□ -0.43
TPM3-211ENST00000368531 OR10G2Q8NGC3 310 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 GNPDA2Q8TDQ7 276 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 SSC4DQ8WTU2 575 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 STMN2Q93045 179 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 GTPBP3Q969Y2 492 aaKnown RBP12.35□□□□□ -0.43
TPM3-211ENST00000368531 STARD4Q96DR4 205 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 ZNF385AQ96PM9 386 aaKnown RBP12.35□□□□□ -0.43
TPM3-211ENST00000368531 GPA33Q99795 319 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 SF3B5Q9BWJ5 86 aaKnown RBP12.35□□□□□ -0.43
TPM3-211ENST00000368531 SFXN3Q9BWM7 321 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 OPN3Q9H1Y3 402 aaPredicted RBP12.35□□□□□ -0.43
TPM3-211ENST00000368531 BCO1Q9HAY6 547 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 NTN4Q9HB63 628 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 S100A14Q9HCY8 104 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 PDP1Q9P0J1 537 aaPredicted RBP12.35□□□□□ -0.43
TPM3-211ENST00000368531 B3GAT1Q9P2W7 334 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms